RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 A0A1B0GW55 424 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 NKX6-3A6NJ46 265 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 F5H0A9 414 aaPredicted RBP13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 DEGS1O15121 323 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 SIGLEC5O15389 551 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 TMPRSS2O15393 492 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 ADAM20O43506 726 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 OR7C1O76099 320 aaPredicted RBP13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 OR2H2O95918 312 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 WNT2P09544 360 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 DUX4L2P0CJ85 424 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 DUX4L3P0CJ86 424 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 DUX4L4P0CJ87 422 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 DUX4L5P0CJ88 424 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 DUX4L6P0CJ89 424 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 DUX4L7P0CJ90 424 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 ZNF44P15621 663 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 GABRR1P24046 479 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 COL10A1Q03692 680 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 IKZF1Q13422 519 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 DUX4L9Q6RFH8 374 aaPredicted RBP13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 SLC36A1Q7Z2H8 476 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 BIVMQ86UB2 503 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 ZNF561Q8N587 486 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 FAM216BQ8N7L0 139 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 WFDC11Q8NEX6 87 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 CLDND2Q8NHS1 167 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 SLC25A38Q96DW6 304 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 NXF2Q9GZY0 626 aaKnown RBP13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 DUX4Q9UBX2 424 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 ITGB1BP2Q9UKP3 347 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 CR1P17927 2039 aa13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 YLPM1P49750 1951 aaKnown RBP13.25□□□□□ -0.29
CSNK1D-212ENST00000580061 CCDC168Q8NDH2 2452 aa13.24□□□□□ -0.29
CSNK1D-212ENST00000580061 SETXQ7Z333 2677 aaKnown RBP13.24□□□□□ -0.29
CSNK1D-212ENST00000580061 SIRPB1O00241 398 aa13.24□□□□□ -0.29
CSNK1D-212ENST00000580061 SLC33A1O00400 549 aaPredicted RBP13.24□□□□□ -0.29
CSNK1D-212ENST00000580061 IGHV2-5P01817 119 aa13.24□□□□□ -0.29
CSNK1D-212ENST00000580061 RPS2P15880 293 aaKnown RBP13.24□□□□□ -0.29
CSNK1D-212ENST00000580061 LMO4P61968 165 aa13.24□□□□□ -0.29
CSNK1D-212ENST00000580061 IL13RA1P78552 427 aa13.24□□□□□ -0.29
CSNK1D-212ENST00000580061 SCN1BQ07699 218 aa13.24□□□□□ -0.29
CSNK1D-212ENST00000580061 FAM189A2Q15884 450 aa13.24□□□□□ -0.29
CSNK1D-212ENST00000580061 SIGIRRQ6IA17 410 aa13.24□□□□□ -0.29
CSNK1D-212ENST00000580061 MZT2AQ6P582 158 aa13.24□□□□□ -0.29
CSNK1D-212ENST00000580061 SAMD12Q8N8I0 201 aa13.24□□□□□ -0.29
CSNK1D-212ENST00000580061 CHST4Q8NCG5 386 aa13.24□□□□□ -0.29
CSNK1D-212ENST00000580061 ZNRF1Q8ND25 227 aa13.24□□□□□ -0.29
CSNK1D-212ENST00000580061 NEIL1Q96FI4 390 aaPredicted RBP13.24□□□□□ -0.29
CSNK1D-212ENST00000580061 MED30Q96HR3 178 aa13.24□□□□□ -0.29
CSNK1D-212ENST00000580061 RHBDL2Q9NX52 303 aa13.24□□□□□ -0.29
CSNK1D-212ENST00000580061 RCC2Q9P258 522 aaKnown RBP13.24□□□□□ -0.29
CSNK1D-212ENST00000580061 PCDHB10Q9UN67 800 aa13.24□□□□□ -0.29
CSNK1D-212ENST00000580061 MAP1AP78559 2803 aaPredicted RBP13.24□□□□□ -0.29
CSNK1D-212ENST00000580061 A0A075B6Q4 140 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 TRAV24A0A0B4J272 114 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 TMEM82A0PJX8 343 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 METTL21EPA6NDL7 271 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 CYSRT1A8MQ03 144 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 FOXI3A8MTJ6 420 aaPredicted RBP13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 SOCS1O15524 211 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 PSPNO60542 156 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 HPGDSO60760 199 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 ZNF737O75373 536 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 FCN3O75636 299 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 SELLP14151 372 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 USF1P22415 310 aaPredicted RBP13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 VEGFCP49767 419 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 CNPY1Q3B7I2 92 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 UBE2NLQ5JXB2 153 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 ZNF841Q6ZN19 808 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 C17orf107Q6ZR85 190 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 NLRC3Q7RTR2 1065 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 OR8B3Q8NGG8 313 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 OR56B1Q8NGI3 324 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 MCFD2Q8NI22 146 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 SNX22Q96L94 193 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 CMTM3Q96MX0 182 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 OR8B2Q96RD0 313 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 REG4Q9BYZ8 158 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 SHARPINQ9H0F6 387 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 ATG5Q9H1Y0 275 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 ABCG5Q9H222 651 aa13.23□□□□□ -0.29
CSNK1D-212ENST00000580061 ZNF469Q96JG9 3925 aaPredicted RBP13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 RNF223E7ERA6 249 aa13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 K7N7A8 449 aa13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 RAB27BO00194 218 aa13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 CTDSP2O14595 271 aa13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 DVL1O14640 695 aa13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 TK1P04183 234 aa13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 BLVRBP30043 206 aaPredicted RBP13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 PITPNBP48739 271 aa13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 TMEM50BP56557 158 aa13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 SEC61A1P61619 476 aaKnown RBP13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 LOXL1Q08397 574 aaPredicted RBP13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 MOGAT2Q3SYC2 334 aa13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 ATAD3CQ5T2N8 411 aa13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 CMTM4Q8IZR5 234 aa13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 ASCC1Q8N9N2 400 aaKnown RBP13.22□□□□□ -0.29
CSNK1D-212ENST00000580061 SUMF2Q8NBJ7 301 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms