RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 CRTAPO75718 401 aaPredicted RBP7.11□□□□□ -1.27
NUP88-211ENST00000575976 BPNT1O95861 308 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 MPIG6BO95866 241 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 OR2H2O95918 312 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 IL1AP01583 271 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 ZNF44P15621 663 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 ARSBP15848 533 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 MGMTP16455 207 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 CFPP27918 469 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 GZMKP49863 264 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 RBM11P57052 281 aaKnown RBP7.11□□□□□ -1.27
NUP88-211ENST00000575976 LCN2P80188 198 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 QRFPP83859 136 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 SCN1BQ07699 218 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 PLA2G7Q13093 441 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 UNC119Q13432 240 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 IL13RA2Q14627 380 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 TAF9Q16594 264 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 ESCO2Q56NI9 601 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 NHLRC3Q5JS37 347 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 SPIN3Q5JUX0 258 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 CYB5R2Q6BCY4 276 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 SFXN4Q6P4A7 337 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 ZNF561Q8N587 486 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 LINC01356Q8N9X3 169 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 TMEM185AQ8NFB2 350 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 FAM3DQ96BQ1 224 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 MSI2Q96DH6 328 aaKnown RBP7.11□□□□□ -1.27
NUP88-211ENST00000575976 MRPS24Q96EL2 167 aaKnown RBP7.11□□□□□ -1.27
NUP88-211ENST00000575976 SMR3AQ99954 134 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 SSBP3Q9BWW4 388 aaPredicted RBP7.11□□□□□ -1.27
NUP88-211ENST00000575976 SELENOIQ9C0D9 397 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 CST11Q9H112 138 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 GSX1Q9H4S2 264 aaPredicted RBP7.11□□□□□ -1.27
NUP88-211ENST00000575976 CLN8Q9UBY8 286 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 ST3GAL6Q9Y274 331 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 CEPT1Q9Y6K0 416 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 CR1P17927 2039 aa7.11□□□□□ -1.27
NUP88-211ENST00000575976 TMEM272A0A1B0GTI8 110 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 A8MXK9 166 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 B4DSR2 109 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 K7N7A8 449 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 PSPNO60542 156 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 ZNF737O75373 536 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 PAHP00439 452 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 TK1P04183 234 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 MSMBP08118 114 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 SNRPBP14678 240 aaKnown RBP7.1□□□□□ -1.27
NUP88-211ENST00000575976 ZNF16P17020 682 aaPredicted RBP7.1□□□□□ -1.27
NUP88-211ENST00000575976 NDUFB7P17568 137 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 GABRR1P24046 479 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 LMO1P25800 156 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 RANBP1P43487 201 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 NPY4RP50391 375 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 TMBIM6P55061 237 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 RPS27AP62979 156 aaKnown RBP7.1□□□□□ -1.27
NUP88-211ENST00000575976 KRTAP1-1Q07627 177 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 BLMHQ13867 455 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 SPCS2Q15005 226 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 MPV17LQ2QL34 196 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 LRRC10Q5BKY1 277 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 IDNKQ5T6J7 187 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 C17orf107Q6ZR85 190 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 USP43Q70EL4 1123 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 OR2W3Q7Z3T1 314 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 ASCC1Q8N9N2 400 aaKnown RBP7.1□□□□□ -1.27
NUP88-211ENST00000575976 OR4S1Q8NGB4 309 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 KCNG3Q8TAE7 436 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 NDNFQ8TB73 568 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 RAB2BQ8WUD1 216 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 ST8SIA4Q92187 359 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 SNX22Q96L94 193 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 Q96M66 194 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 MDFIQ99750 246 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 TM2D1Q9BX74 207 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 TMEM59Q9BXS4 323 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 BARHL1Q9BZE3 327 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 CHST6Q9GZX3 395 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 SHARPINQ9H0F6 387 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 LPAR5Q9H1C0 372 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 DCSTAMPQ9H295 470 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 LIN7BQ9HAP6 207 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 SLC25A10Q9UBX3 287 aaPredicted RBP7.1□□□□□ -1.27
NUP88-211ENST00000575976 OR5V1Q9UGF6 321 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 JMJD1CQ15652 2540 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 CSPG4Q6UVK1 2322 aa7.1□□□□□ -1.27
NUP88-211ENST00000575976 LOC105371242A0A075B767 164 aa7.09□□□□□ -1.27
NUP88-211ENST00000575976 A0A0A6YYD4 124 aa7.09□□□□□ -1.27
NUP88-211ENST00000575976 TRAV24A0A0B4J272 114 aa7.09□□□□□ -1.27
NUP88-211ENST00000575976 CCDC160A6NGH7 325 aa7.09□□□□□ -1.27
NUP88-211ENST00000575976 C22orf46C9J442 243 aa7.09□□□□□ -1.27
NUP88-211ENST00000575976 SLC33A1O00400 549 aaPredicted RBP7.09□□□□□ -1.27
NUP88-211ENST00000575976 HSPB6O14558 160 aa7.09□□□□□ -1.27
NUP88-211ENST00000575976 NOL3O60936 208 aaKnown RBP7.09□□□□□ -1.27
NUP88-211ENST00000575976 OR7C1O76099 320 aaPredicted RBP7.09□□□□□ -1.27
NUP88-211ENST00000575976 LY6G6DO95868 133 aa7.09□□□□□ -1.27
NUP88-211ENST00000575976 TGFAP01135 160 aa7.09□□□□□ -1.27
NUP88-211ENST00000575976 OR3A1P47881 315 aa7.09□□□□□ -1.27
NUP88-211ENST00000575976 EFNB2P52799 333 aa7.09□□□□□ -1.27
NUP88-211ENST00000575976 PAX2Q02962 417 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms