RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 POLR3KQ9Y2Y1 108 aaPredicted RBP11.61□□□□□ -0.55
RPAIN-217ENST00000575711 MAST4O15021 2626 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 PPIAL4CA0A0B4J2A2 164 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 K7N7A8 449 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 SIRPB1O00241 398 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 GABARAPO95166 117 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 MPIG6BO95866 241 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 ECDO95905 644 aaPredicted RBP11.6□□□□□ -0.55
RPAIN-217ENST00000575711 TK1P04183 234 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 VSIG8P0DPA2 414 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 GABRR1P24046 479 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 CFPP27918 469 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 TGFBR1P36897 503 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 CLDN12P56749 244 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 NCS1P62166 190 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 MPV17LQ2QL34 196 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 Q6P435 159 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 BTN2A1Q7KYR7 527 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 OR2W3Q7Z3T1 314 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 NR2C2APQ86WQ0 139 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 FGFRL1Q8N441 504 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 TMEM104Q8NE00 496 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 OR5D13Q8NGL4 314 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 KCNG3Q8TAE7 436 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 H1FXQ92522 213 aaKnown RBP11.6□□□□□ -0.55
RPAIN-217ENST00000575711 FAM46BQ96A09 425 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 FAM3DQ96BQ1 224 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 SELENOIQ9C0D9 397 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 OCEL1Q9H607 264 aa11.6□□□□□ -0.55
RPAIN-217ENST00000575711 MAP1AP78559 2803 aaPredicted RBP11.6□□□□□ -0.55
RPAIN-217ENST00000575711 CELSR1Q9NYQ6 3014 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 A0A0G2JK05 382 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 A0A0G2JMP0 313 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 A0A0X1KG70 313 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 TMEM82A0PJX8 343 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 TMEM14DPA8MWL7 114 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 GEMIN2O14893 280 aaKnown RBP11.59□□□□□ -0.55
RPAIN-217ENST00000575711 ENSAO43768 121 aaKnown RBP11.59□□□□□ -0.55
RPAIN-217ENST00000575711 PSPNO60542 156 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 ZNF737O75373 536 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 FCN3O75636 299 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 OR7C1O76099 320 aaPredicted RBP11.59□□□□□ -0.55
RPAIN-217ENST00000575711 CLEC2LP0C7M8 214 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 GATA3P23771 443 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 LMO1P25800 156 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 SERPINB10P48595 397 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 VBP1P61758 197 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 PDCD1Q15116 288 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 GRK1Q15835 563 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 TAF9Q16594 264 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 DCAF12L2Q5VW00 463 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 OR10K2Q6IF99 312 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 SFXN4Q6P4A7 337 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 BTNL3Q6UXE8 466 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 C17orf107Q6ZR85 190 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 SLC16A12Q6ZSM3 486 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 CLVS1Q8IUQ0 354 aaPredicted RBP11.59□□□□□ -0.55
RPAIN-217ENST00000575711 OR8H2Q8N162 312 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 OR4M2Q8NGB6 313 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 OR51D1Q8NGF3 324 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 RAB40AQ8WXH6 277 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 TMEM59Q9BXS4 323 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 CHST6Q9GZX3 395 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 NAA50Q9GZZ1 169 aaKnown RBP11.59□□□□□ -0.55
RPAIN-217ENST00000575711 GSX1Q9H4S2 264 aaPredicted RBP11.59□□□□□ -0.55
RPAIN-217ENST00000575711 LIN7BQ9HAP6 207 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 YAE1D1Q9NRH1 226 aa11.59□□□□□ -0.55
RPAIN-217ENST00000575711 IGHV2-70DA0A0C4DH43 119 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 FAM90A10PA6NDY2 464 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 FAM90A18PA6NE21 464 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 FAM90A16PA6NEW6 464 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 FAM90A20PA6NIJ5 464 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 FAM90A8PA6NJQ4 464 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 FAM90A7PA6NKC0 464 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 FAM90A22PA8MWA6 464 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 FAM90A12PA8MX19 464 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 FAM90A5PA8MXJ8 464 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 FAM90A23PA8MXZ1 464 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 C22orf46C9J442 243 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 SLC33A1O00400 549 aaPredicted RBP11.58□□□□□ -0.56
RPAIN-217ENST00000575711 MGST3O14880 152 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 NOL3O60936 208 aaKnown RBP11.58□□□□□ -0.56
RPAIN-217ENST00000575711 IL1AP01583 271 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 FAM90A15PP0C7V4 464 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 FAM90A13PP0C7W8 464 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 FAM90A14PP0C7W9 464 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 FAM90A24PP0C7X0 464 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 QRFPP83859 136 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 CTF1Q16619 201 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 C2orf76Q3KRA6 126 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 PAN3Q58A45 887 aaKnown RBP11.58□□□□□ -0.56
RPAIN-217ENST00000575711 GDPD3Q7L5L3 318 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 CROCCP3Q8IVE0 287 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 Q96M66 194 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 NUDT16L1Q9BRJ7 211 aaKnown RBP11.58□□□□□ -0.56
RPAIN-217ENST00000575711 DCTN5Q9BTE1 182 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 URM1Q9BTM9 101 aaKnown RBP11.58□□□□□ -0.56
RPAIN-217ENST00000575711 SHARPINQ9H0F6 387 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 PPA2Q9H2U2 334 aa11.58□□□□□ -0.56
RPAIN-217ENST00000575711 KCNK15Q9H427 330 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms