RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 ARGLU1Q9NWB6 273 aaPredicted RBP13.8□□□□□ -0.2
CCDC40-211ENST00000574099 ACTR3BQ9P1U1 418 aa13.8□□□□□ -0.2
CCDC40-211ENST00000574099 DNAH7Q8WXX0 4024 aa13.8□□□□□ -0.2
CCDC40-211ENST00000574099 LY6LH3BQJ8 138 aa13.79□□□□□ -0.2
CCDC40-211ENST00000574099 LYL1P12980 280 aa13.79□□□□□ -0.2
CCDC40-211ENST00000574099 TMEM11P17152 192 aa13.79□□□□□ -0.2
CCDC40-211ENST00000574099 PRKACAP17612 351 aa13.79□□□□□ -0.2
CCDC40-211ENST00000574099 CD34P28906 385 aa13.79□□□□□ -0.2
CCDC40-211ENST00000574099 ERP29P30040 261 aaKnown RBP13.79□□□□□ -0.2
CCDC40-211ENST00000574099 GLIPR1P48060 266 aa13.79□□□□□ -0.2
CCDC40-211ENST00000574099 POU3F4P49335 361 aa13.79□□□□□ -0.2
CCDC40-211ENST00000574099 CXCR4P61073 352 aa13.79□□□□□ -0.2
CCDC40-211ENST00000574099 CDK5Q00535 292 aa13.79□□□□□ -0.2
CCDC40-211ENST00000574099 HNF4GQ14541 408 aa13.79□□□□□ -0.2
CCDC40-211ENST00000574099 KPNB1Q14974 876 aaKnown RBP13.79□□□□□ -0.2
CCDC40-211ENST00000574099 ZNF322Q6U7Q0 402 aaPredicted RBP13.79□□□□□ -0.2
CCDC40-211ENST00000574099 SLC35E3Q7Z769 313 aa13.79□□□□□ -0.2
CCDC40-211ENST00000574099 ENTHD1Q8IYW4 607 aa13.79□□□□□ -0.2
CCDC40-211ENST00000574099 TOMM40LQ969M1 308 aa13.79□□□□□ -0.2
CCDC40-211ENST00000574099 RPEQ96AT9 228 aa13.79□□□□□ -0.2
CCDC40-211ENST00000574099 CREB3L1Q96BA8 519 aa13.79□□□□□ -0.2
CCDC40-211ENST00000574099 GLS2Q9UI32 602 aa13.79□□□□□ -0.2
CCDC40-211ENST00000574099 TMEM14AQ9Y6G1 99 aa13.79□□□□□ -0.2
CCDC40-211ENST00000574099 DHRS7CA6NNS2 312 aa13.78□□□□□ -0.2
CCDC40-211ENST00000574099 ENTPD6O75354 484 aa13.78□□□□□ -0.2
CCDC40-211ENST00000574099 RPLP1P05386 114 aaKnown RBP13.78□□□□□ -0.2
CCDC40-211ENST00000574099 NFYBP25208 207 aa13.78□□□□□ -0.2
CCDC40-211ENST00000574099 PTGFRP43088 359 aa13.78□□□□□ -0.2
CCDC40-211ENST00000574099 PRRX1P54821 245 aa13.78□□□□□ -0.2
CCDC40-211ENST00000574099 AESQ08117 197 aa13.78□□□□□ -0.2
CCDC40-211ENST00000574099 FAM98BQ52LJ0 330 aaKnown RBP13.78□□□□□ -0.2
CCDC40-211ENST00000574099 ZFAND6Q6FIF0 208 aa13.78□□□□□ -0.2
CCDC40-211ENST00000574099 TMEM179BQ7Z7N9 219 aa13.78□□□□□ -0.2
CCDC40-211ENST00000574099 SBSPONQ8IVN8 264 aa13.78□□□□□ -0.2
CCDC40-211ENST00000574099 FAM58AQ8N1B3 248 aa13.78□□□□□ -0.2
CCDC40-211ENST00000574099 STPG2Q8N412 459 aa13.78□□□□□ -0.2
CCDC40-211ENST00000574099 COMMD1Q8N668 190 aa13.78□□□□□ -0.2
CCDC40-211ENST00000574099 DRAM1Q8N682 238 aa13.78□□□□□ -0.2
CCDC40-211ENST00000574099 BORCS8Q96FH0 119 aa13.78□□□□□ -0.2
CCDC40-211ENST00000574099 CNN2Q99439 309 aaKnown RBP13.78□□□□□ -0.2
CCDC40-211ENST00000574099 DCLRE1BQ9H816 532 aa13.78□□□□□ -0.2
CCDC40-211ENST00000574099 SCOCQ9UIL1 159 aa13.78□□□□□ -0.2
CCDC40-211ENST00000574099 ZNF256Q9Y2P7 627 aaPredicted RBP13.78□□□□□ -0.2
CCDC40-211ENST00000574099 TRBV2A0A0J9YWF9 115 aa13.77□□□□□ -0.21
CCDC40-211ENST00000574099 OOSP1A8MZH6 123 aa13.77□□□□□ -0.21
CCDC40-211ENST00000574099 RPP14O95059 124 aaKnown RBP13.77□□□□□ -0.21
CCDC40-211ENST00000574099 IGHV3-7P01780 117 aa13.77□□□□□ -0.21
CCDC40-211ENST00000574099 OSMP13725 252 aa13.77□□□□□ -0.21
CCDC40-211ENST00000574099 FUT6P51993 359 aa13.77□□□□□ -0.21
CCDC40-211ENST00000574099 C16orf89Q6UX73 402 aa13.77□□□□□ -0.21
CCDC40-211ENST00000574099 Q6ZSR3 168 aa13.77□□□□□ -0.21
CCDC40-211ENST00000574099 FOXRED2Q8IWF2 684 aa13.77□□□□□ -0.21
CCDC40-211ENST00000574099 Q8IYB0 196 aa13.77□□□□□ -0.21
CCDC40-211ENST00000574099 OR4D6Q8NGJ1 314 aa13.77□□□□□ -0.21
CCDC40-211ENST00000574099 OR8U1Q8NH10 309 aa13.77□□□□□ -0.21
CCDC40-211ENST00000574099 FAM107BQ9H098 131 aa13.77□□□□□ -0.21
CCDC40-211ENST00000574099 ARL8BQ9NVJ2 186 aa13.77□□□□□ -0.21
CCDC40-211ENST00000574099 TAS2R3Q9NYW6 316 aa13.77□□□□□ -0.21
CCDC40-211ENST00000574099 TVP23BQ9NYZ1 205 aa13.77□□□□□ -0.21
CCDC40-211ENST00000574099 GSTK1Q9Y2Q3 226 aa13.77□□□□□ -0.21
CCDC40-211ENST00000574099 SNX5Q9Y5X3 404 aa13.77□□□□□ -0.21
CCDC40-211ENST00000574099 SMAD5-AS1Q9Y6J3 95 aa13.77□□□□□ -0.21
CCDC40-211ENST00000574099 FAM90A18PA6NE21 464 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 FAM90A16PA6NEW6 464 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 FAM90A20PA6NIJ5 464 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 LINC01548A6NM66 108 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 FAM90A9PA6NNJ1 464 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 FAM90A12PA8MX19 464 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 FAM90A5PA8MXJ8 464 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 SYT7O43581 403 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 GATBO75879 557 aaKnown RBP13.76□□□□□ -0.21
CCDC40-211ENST00000574099 OR2H2O95918 312 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 CST1P01037 141 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 FAM90A15PP0C7V4 464 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 FAM90A13PP0C7W8 464 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 FAM90A14PP0C7W9 464 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 FAM90A24PP0C7X0 464 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 CCL1P22362 96 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 DIAPH2-AS1Q14236 149 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 ZNF146Q15072 292 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 ZNF260Q3ZCT1 412 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 OVCH2Q7RTZ1 564 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 THNSL2Q86YJ6 484 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 SLC35F2Q8IXU6 374 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 HS3ST5Q8IZT8 346 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 CORO2AQ92828 525 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 LEAP2Q969E1 77 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 SEBOXQ9HB31 216 aaPredicted RBP13.76□□□□□ -0.21
CCDC40-211ENST00000574099 EXOSC4Q9NPD3 245 aaKnown RBP13.76□□□□□ -0.21
CCDC40-211ENST00000574099 TAGLN3Q9UI15 199 aa13.76□□□□□ -0.21
CCDC40-211ENST00000574099 MRM2Q9UI43 246 aaKnown RBP13.76□□□□□ -0.21
CCDC40-211ENST00000574099 A0A1W2PPI3 338 aa13.75□□□□□ -0.21
CCDC40-211ENST00000574099 ODAMA1E959 279 aa13.75□□□□□ -0.21
CCDC40-211ENST00000574099 FGF16O43320 207 aa13.75□□□□□ -0.21
CCDC40-211ENST00000574099 E2F6O75461 281 aa13.75□□□□□ -0.21
CCDC40-211ENST00000574099 CYB5AP00167 134 aa13.75□□□□□ -0.21
CCDC40-211ENST00000574099 IGKV1D-33P01593 117 aa13.75□□□□□ -0.21
CCDC40-211ENST00000574099 IGKV1-33P01594 117 aa13.75□□□□□ -0.21
CCDC40-211ENST00000574099 IGHG2P01859 326 aa13.75□□□□□ -0.21
CCDC40-211ENST00000574099 SPIN3Q5JUX0 258 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms