RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 PSPNO60542 156 aa8.11□□□□□ -1.11
RPA1-206ENST00000573994 WBP4O75554 376 aaKnown RBP8.11□□□□□ -1.11
RPA1-206ENST00000573994 ALX3O95076 343 aa8.11□□□□□ -1.11
RPA1-206ENST00000573994 ZFPL1O95159 310 aa8.11□□□□□ -1.11
RPA1-206ENST00000573994 RBP4P02753 201 aa8.11□□□□□ -1.11
RPA1-206ENST00000573994 MT-ND2P03891 347 aa8.11□□□□□ -1.11
RPA1-206ENST00000573994 RPLP1P05386 114 aaKnown RBP8.11□□□□□ -1.11
RPA1-206ENST00000573994 HCKP08631 526 aa8.11□□□□□ -1.11
RPA1-206ENST00000573994 ZNF728P0DKX0 622 aa8.11□□□□□ -1.11
RPA1-206ENST00000573994 PEX2P28328 305 aa8.11□□□□□ -1.11
RPA1-206ENST00000573994 GTF2A1P52655 376 aaPredicted RBP8.11□□□□□ -1.11
RPA1-206ENST00000573994 PDZK1IP1Q13113 114 aa8.11□□□□□ -1.11
RPA1-206ENST00000573994 AANATQ16613 207 aa8.11□□□□□ -1.11
RPA1-206ENST00000573994 FAM58AQ8N1B3 248 aa8.11□□□□□ -1.11
RPA1-206ENST00000573994 OR4S1Q8NGB4 309 aa8.11□□□□□ -1.11
RPA1-206ENST00000573994 OR52N4Q8NGI2 321 aa8.11□□□□□ -1.11
RPA1-206ENST00000573994 LINC01006Q8NI28 216 aa8.11□□□□□ -1.11
RPA1-206ENST00000573994 CYGBQ8WWM9 190 aa8.11□□□□□ -1.11
RPA1-206ENST00000573994 RGP1Q92546 391 aaPredicted RBP8.11□□□□□ -1.11
RPA1-206ENST00000573994 NKX3-1Q99801 234 aaPredicted RBP8.11□□□□□ -1.11
RPA1-206ENST00000573994 SSX3Q99909 188 aa8.11□□□□□ -1.11
RPA1-206ENST00000573994 ZCCHC4Q9H5U6 513 aa8.11□□□□□ -1.11
RPA1-206ENST00000573994 ZNF696Q9H7X3 374 aa8.11□□□□□ -1.11
RPA1-206ENST00000573994 DHDHQ9UQ10 334 aa8.11□□□□□ -1.11
RPA1-206ENST00000573994 RNF114Q9Y508 228 aa8.11□□□□□ -1.11
RPA1-206ENST00000573994 IRGMA1A4Y4 181 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 TMEM212A6NML5 194 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 C17orf98A8MV24 154 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 OR2H2O95918 312 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 ARG1P05089 322 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 CCDC159P0C7I6 412 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 LIMS3P0CW19 117 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 LIMS4P0CW20 117 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 TGFBR2P37173 567 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 OR3A1P47881 315 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 SOX2P48431 317 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 ETV1P50549 477 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 GBX2P52951 348 aaPredicted RBP8.1□□□□□ -1.11
RPA1-206ENST00000573994 LGALS4P56470 323 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 MEF2CQ06413 473 aaPredicted RBP8.1□□□□□ -1.11
RPA1-206ENST00000573994 IL18R1Q13478 541 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 RCN1Q15293 331 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 LRRC75BQ2VPJ9 315 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 SPIN3Q5JUX0 258 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 XAF1Q6GPH4 301 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 DYNAPQ8N1N2 210 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 ZSCAN4Q8NAM6 433 aaPredicted RBP8.1□□□□□ -1.11
RPA1-206ENST00000573994 OR5D14Q8NGL3 314 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 OR5AK2Q8NH90 309 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 PPP1R35Q8TAP8 253 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 CPNE2Q96FN4 548 aaPredicted RBP8.1□□□□□ -1.11
RPA1-206ENST00000573994 SNX22Q96L94 193 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 ZNF714Q96N38 554 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 CITED1Q99966 193 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 JAM3Q9BX67 310 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 COMMD4Q9H0A8 199 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 HMG20AQ9NP66 347 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 EXOSC4Q9NPD3 245 aaKnown RBP8.1□□□□□ -1.11
RPA1-206ENST00000573994 ING3Q9NXR8 418 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 SIGLEC9Q9Y336 463 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 PCDHGB5Q9Y5G0 923 aa8.1□□□□□ -1.11
RPA1-206ENST00000573994 hADV38S2A0JD32 116 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 ODF3BA8MYP8 253 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 ANKRD65E5RJM6 399 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 SULT1B1O43704 296 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 CHST1O43916 411 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 CLPXO76031 633 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 KDM4BO94953 1096 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 IGHV1-8P0DP01 117 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 ZNF44P15621 663 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 JUNBP17275 347 aaPredicted RBP8.09□□□□□ -1.11
RPA1-206ENST00000573994 GABRA5P31644 462 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 P2RX3P56373 397 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 PROK1P58294 105 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 ZP1P60852 638 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 SCN1BQ07699 218 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 DYNC1I2Q13409 638 aaKnown RBP8.09□□□□□ -1.11
RPA1-206ENST00000573994 ZNF146Q15072 292 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 CCDC58Q4VC31 144 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 LDLRAD2Q5SZI1 272 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 PRAMEF5Q5TYX0 476 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 OR2G6Q5TZ20 316 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 ZNF691Q5VV52 312 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 HIST2H2BDQ6DRA6 164 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 CRIP3Q6Q6R5 217 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 BAIAP2L2Q6UXY1 529 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 TRAPPC6BQ86SZ2 158 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 SERPINA12Q8IW75 414 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 SAXO1Q8IYX7 474 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 PACRGLQ8N7B6 248 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 OR51A2Q8NGJ7 313 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 OR13D1Q8NGV5 346 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 FAM192AQ9GZU8 254 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 MEGF9Q9H1U4 602 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 RAB18Q9NP72 206 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 TAS2R4Q9NYW5 299 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 LINC00312Q9Y6C7 94 aa8.09□□□□□ -1.11
RPA1-206ENST00000573994 FUOMA2VDF0 154 aa8.08□□□□□ -1.12
RPA1-206ENST00000573994 FAM172BPA6NC97 362 aa8.08□□□□□ -1.12
RPA1-206ENST00000573994 HSPB6O14558 160 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms