RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 NHLRC3Q5JS37 347 aa11.28□□□□□ -0.6
LINC01996-201ENST00000573270 LYPD2Q6UXB3 125 aa11.28□□□□□ -0.6
LINC01996-201ENST00000573270 MUC20Q8N307 709 aaPredicted RBP11.28□□□□□ -0.6
LINC01996-201ENST00000573270 CD177Q8N6Q3 437 aa11.28□□□□□ -0.6
LINC01996-201ENST00000573270 GDPD1Q8N9F7 314 aa11.28□□□□□ -0.6
LINC01996-201ENST00000573270 Q8NFD4 153 aa11.28□□□□□ -0.6
LINC01996-201ENST00000573270 OR51T1Q8NGJ9 327 aa11.28□□□□□ -0.6
LINC01996-201ENST00000573270 ANGPTL6Q8NI99 470 aa11.28□□□□□ -0.6
LINC01996-201ENST00000573270 Q96MF0 132 aa11.28□□□□□ -0.6
LINC01996-201ENST00000573270 CCL13Q99616 98 aa11.28□□□□□ -0.6
LINC01996-201ENST00000573270 FOXC2Q99958 501 aa11.28□□□□□ -0.6
LINC01996-201ENST00000573270 LPAR5Q9H1C0 372 aa11.28□□□□□ -0.6
LINC01996-201ENST00000573270 TMEM165Q9HC07 324 aa11.28□□□□□ -0.6
LINC01996-201ENST00000573270 RHBDL2Q9NX52 303 aa11.28□□□□□ -0.6
LINC01996-201ENST00000573270 FBLN5Q9UBX5 448 aa11.28□□□□□ -0.6
LINC01996-201ENST00000573270 ETV7Q9Y603 341 aa11.28□□□□□ -0.6
LINC01996-201ENST00000573270 ABCA2Q9BZC7 2435 aa11.28□□□□□ -0.6
LINC01996-201ENST00000573270 VPS13CQ709C8 3753 aa11.28□□□□□ -0.6
LINC01996-201ENST00000573270 CCDC168Q8NDH2 2452 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 CR1P17927 2039 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 IGHV4-61A0A0C4DH41 118 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 VGLL3A8MV65 326 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 HSPB6O14558 160 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 ADAM20O43506 726 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 OR7C1O76099 320 aaPredicted RBP11.27□□□□□ -0.61
LINC01996-201ENST00000573270 OR2H2O95918 312 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 RPS2P15880 293 aaKnown RBP11.27□□□□□ -0.61
LINC01996-201ENST00000573270 CPT2P23786 658 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 DSCR9P59020 149 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 COL10A1Q03692 680 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 SCN1BQ07699 218 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 ZNF146Q15072 292 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 TAF9Q16594 264 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 TMEM155Q4W5P6 130 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 DCDC5Q6ZRR9 648 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 FGFRL1Q8N441 504 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 SPICQ8N5J4 248 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 SAMD12Q8N8I0 201 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 ASCC1Q8N9N2 400 aaKnown RBP11.27□□□□□ -0.61
LINC01996-201ENST00000573270 WFDC11Q8NEX6 87 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 CLDND2Q8NHS1 167 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 DIRAS2Q96HU8 199 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 TM2D1Q9BX74 207 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 AKIP1Q9NQ31 210 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 PCDHB16Q9NRJ7 776 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 COMMD3Q9UBI1 195 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 ITGB1BP2Q9UKP3 347 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 SPATA2Q9UM82 520 aa11.27□□□□□ -0.61
LINC01996-201ENST00000573270 CREBBPQ92793 2442 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 A0A096LNT2 108 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 SIGLEC5O15389 551 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 HPGDSO60760 199 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 EIF4EP06730 217 aaKnown RBP11.26□□□□□ -0.61
LINC01996-201ENST00000573270 SLC25A16P16260 332 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 RAB6AP20340 208 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 PRDX2P32119 198 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 TNFSF8P32971 234 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 SEC61A1P61619 476 aaKnown RBP11.26□□□□□ -0.61
LINC01996-201ENST00000573270 KCNJ8Q15842 424 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 MPV17LQ2QL34 196 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 MOGAT2Q3SYC2 334 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 UBE2NLQ5JXB2 153 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 NKAPLQ5M9Q1 402 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 HACD4Q5VWC8 232 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 SHEQ5VZ18 495 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 Q6P435 159 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 ZNF788Q6ZQV5 615 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 LINC00596Q86U02 117 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 LRRC28Q86X40 367 aaPredicted RBP11.26□□□□□ -0.61
LINC01996-201ENST00000573270 LAX1Q8IWV1 398 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 TMEM185AQ8NFB2 350 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 MRPS24Q96EL2 167 aaKnown RBP11.26□□□□□ -0.61
LINC01996-201ENST00000573270 URM1Q9BTM9 101 aaKnown RBP11.26□□□□□ -0.61
LINC01996-201ENST00000573270 CHST6Q9GZX3 395 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 PPA2Q9H2U2 334 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 RAB22AQ9UL26 194 aa11.26□□□□□ -0.61
LINC01996-201ENST00000573270 TMEM82A0PJX8 343 aa11.25□□□□□ -0.61
LINC01996-201ENST00000573270 F5H0A9 414 aaPredicted RBP11.25□□□□□ -0.61
LINC01996-201ENST00000573270 SLC33A1O00400 549 aaPredicted RBP11.25□□□□□ -0.61
LINC01996-201ENST00000573270 TMPRSS2O15393 492 aa11.25□□□□□ -0.61
LINC01996-201ENST00000573270 SOCS1O15524 211 aa11.25□□□□□ -0.61
LINC01996-201ENST00000573270 FCN3O75636 299 aa11.25□□□□□ -0.61
LINC01996-201ENST00000573270 FSTL3O95633 263 aa11.25□□□□□ -0.61
LINC01996-201ENST00000573270 IGHV2-5P01817 119 aa11.25□□□□□ -0.61
LINC01996-201ENST00000573270 IL2RGP31785 369 aa11.25□□□□□ -0.61
LINC01996-201ENST00000573270 VEGFCP49767 419 aa11.25□□□□□ -0.61
LINC01996-201ENST00000573270 IL13RA1P78552 427 aa11.25□□□□□ -0.61
LINC01996-201ENST00000573270 ATXN7L3Q14CW9 347 aaPredicted RBP11.25□□□□□ -0.61
LINC01996-201ENST00000573270 ATAD3CQ5T2N8 411 aa11.25□□□□□ -0.61
LINC01996-201ENST00000573270 PRSS57Q6UWY2 283 aa11.25□□□□□ -0.61
LINC01996-201ENST00000573270 CCDC190Q86UF4 302 aa11.25□□□□□ -0.61
LINC01996-201ENST00000573270 ZNRF1Q8ND25 227 aa11.25□□□□□ -0.61
LINC01996-201ENST00000573270 OR8B3Q8NGG8 313 aa11.25□□□□□ -0.61
LINC01996-201ENST00000573270 DYRK2Q92630 601 aa11.25□□□□□ -0.61
LINC01996-201ENST00000573270 PTX4Q96A99 478 aa11.25□□□□□ -0.61
LINC01996-201ENST00000573270 PHF21AQ96BD5 680 aa11.25□□□□□ -0.61
LINC01996-201ENST00000573270 SDSLQ96GA7 329 aa11.25□□□□□ -0.61
LINC01996-201ENST00000573270 OR8B2Q96RD0 313 aa11.25□□□□□ -0.61
LINC01996-201ENST00000573270 ATG5Q9H1Y0 275 aa11.25□□□□□ -0.61
LINC01996-201ENST00000573270 MIXL1Q9H2W2 232 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms