RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 DVL1P1P54792 670 aaPredicted RBP18.28■□□□□ 0.52
RAB40B-207ENST00000572603 CAV3P56539 151 aa18.28■□□□□ 0.52
RAB40B-207ENST00000572603 CLDN12P56749 244 aa18.28■□□□□ 0.52
RAB40B-207ENST00000572603 NCS1P62166 190 aa18.28■□□□□ 0.52
RAB40B-207ENST00000572603 GPR176Q14439 515 aa18.28■□□□□ 0.52
RAB40B-207ENST00000572603 HES5Q5TA89 166 aa18.28■□□□□ 0.52
RAB40B-207ENST00000572603 C17orf107Q6ZR85 190 aa18.28■□□□□ 0.52
RAB40B-207ENST00000572603 ST8SIA4Q92187 359 aa18.28■□□□□ 0.52
RAB40B-207ENST00000572603 TMEM186Q96B77 213 aa18.28■□□□□ 0.52
RAB40B-207ENST00000572603 MMP26Q9NRE1 261 aa18.28■□□□□ 0.52
RAB40B-207ENST00000572603 SLC25A10Q9UBX3 287 aaPredicted RBP18.28■□□□□ 0.52
RAB40B-207ENST00000572603 TRAV20A0A0B4J274 112 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 NOTOA8MTQ0 251 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 TMEM14DPA8MWL7 114 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 K7N7A8 449 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 AIPO00170 330 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 SIRPB1O00241 398 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 PSPNO60542 156 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 GTF2F2P13984 249 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 MGMTP16455 207 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 LMO1P25800 156 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 CAPZA1P52907 286 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 MXD1Q05195 221 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 PDCD1Q15116 288 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 CTF1Q16619 201 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 LRRC10Q5BKY1 277 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 GPR107Q5VW38 600 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 OR10K2Q6IF99 312 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 CLEC9AQ6UXN8 241 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 MRPS24Q96EL2 167 aaKnown RBP18.27■□□□□ 0.52
RAB40B-207ENST00000572603 Q96M66 194 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 SHARPINQ9H0F6 387 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 FAM234AQ9H0X4 552 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 BANF2Q9H503 90 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 OR5V1Q9UGF6 321 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 STEAP1Q9UHE8 339 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 ST3GAL6Q9Y274 331 aa18.27■□□□□ 0.52
RAB40B-207ENST00000572603 PPIAL4CA0A0B4J2A2 164 aa18.26■□□□□ 0.51
RAB40B-207ENST00000572603 SLC33A1O00400 549 aaPredicted RBP18.26■□□□□ 0.51
RAB40B-207ENST00000572603 GEMIN2O14893 280 aaKnown RBP18.26■□□□□ 0.51
RAB40B-207ENST00000572603 LDLRAD4O15165 306 aa18.26■□□□□ 0.51
RAB40B-207ENST00000572603 TK1P04183 234 aa18.26■□□□□ 0.51
RAB40B-207ENST00000572603 SLC2A2P11168 524 aaPredicted RBP18.26■□□□□ 0.51
RAB40B-207ENST00000572603 OR3A1P47881 315 aa18.26■□□□□ 0.51
RAB40B-207ENST00000572603 GLCCI1Q86VQ1 547 aa18.26■□□□□ 0.51
RAB40B-207ENST00000572603 ASCC1Q8N9N2 400 aaKnown RBP18.26■□□□□ 0.51
RAB40B-207ENST00000572603 FAM46BQ96A09 425 aa18.26■□□□□ 0.51
RAB40B-207ENST00000572603 IFT22Q9H7X7 185 aa18.26■□□□□ 0.51
RAB40B-207ENST00000572603 PCDHB16Q9NRJ7 776 aa18.26■□□□□ 0.51
RAB40B-207ENST00000572603 HIF1ANQ9NWT6 349 aa18.26■□□□□ 0.51
RAB40B-207ENST00000572603 A0A0B4J203 849 aa18.25■□□□□ 0.51
RAB40B-207ENST00000572603 IGHV2-70DA0A0C4DH43 119 aa18.25■□□□□ 0.51
RAB40B-207ENST00000572603 SH2D1BO14796 132 aa18.25■□□□□ 0.51
RAB40B-207ENST00000572603 CRTAPO75718 401 aaPredicted RBP18.25■□□□□ 0.51
RAB40B-207ENST00000572603 MPIG6BO95866 241 aa18.25■□□□□ 0.51
RAB40B-207ENST00000572603 ZNF44P15621 663 aa18.25■□□□□ 0.51
RAB40B-207ENST00000572603 VBP1P61758 197 aa18.25■□□□□ 0.51
RAB40B-207ENST00000572603 C11orf91Q3C1V1 193 aa18.25■□□□□ 0.51
RAB40B-207ENST00000572603 SFXN4Q6P4A7 337 aa18.25■□□□□ 0.51
RAB40B-207ENST00000572603 BTN2A1Q7KYR7 527 aa18.25■□□□□ 0.51
RAB40B-207ENST00000572603 OR2W3Q7Z3T1 314 aa18.25■□□□□ 0.51
RAB40B-207ENST00000572603 LINC00596Q86U02 117 aa18.25■□□□□ 0.51
RAB40B-207ENST00000572603 OR8H2Q8N162 312 aa18.25■□□□□ 0.51
RAB40B-207ENST00000572603 CHST4Q8NCG5 386 aa18.25■□□□□ 0.51
RAB40B-207ENST00000572603 OR4S1Q8NGB4 309 aa18.25■□□□□ 0.51
RAB40B-207ENST00000572603 OR51D1Q8NGF3 324 aa18.25■□□□□ 0.51
RAB40B-207ENST00000572603 FAM3DQ96BQ1 224 aa18.25■□□□□ 0.51
RAB40B-207ENST00000572603 SNX22Q96L94 193 aa18.25■□□□□ 0.51
RAB40B-207ENST00000572603 DCTN5Q9BTE1 182 aa18.25■□□□□ 0.51
RAB40B-207ENST00000572603 CST11Q9H112 138 aa18.25■□□□□ 0.51
RAB40B-207ENST00000572603 FBLN5Q9UBX5 448 aa18.25■□□□□ 0.51
RAB40B-207ENST00000572603 GLS2Q9UI32 602 aa18.25■□□□□ 0.51
RAB40B-207ENST00000572603 RPUSD1Q9UJJ7 312 aaKnown RBP18.25■□□□□ 0.51
RAB40B-207ENST00000572603 HIVEP2P31629 2446 aa18.25■□□□□ 0.51
RAB40B-207ENST00000572603 LOC105371242A0A075B767 164 aa18.24■□□□□ 0.51
RAB40B-207ENST00000572603 TRAV24A0A0B4J272 114 aa18.24■□□□□ 0.51
RAB40B-207ENST00000572603 GPR37O15354 613 aa18.24■□□□□ 0.51
RAB40B-207ENST00000572603 ARSBP15848 533 aa18.24■□□□□ 0.51
RAB40B-207ENST00000572603 NDUFB7P17568 137 aa18.24■□□□□ 0.51
RAB40B-207ENST00000572603 PLA2G7Q13093 441 aa18.24■□□□□ 0.51
RAB40B-207ENST00000572603 TAF9Q16594 264 aa18.24■□□□□ 0.51
RAB40B-207ENST00000572603 MPV17LQ2QL34 196 aa18.24■□□□□ 0.51
RAB40B-207ENST00000572603 METAP1DQ6UB28 335 aaPredicted RBP18.24■□□□□ 0.51
RAB40B-207ENST00000572603 LY6G5BQ8NDX9 201 aa18.24■□□□□ 0.51
RAB40B-207ENST00000572603 C8orf46Q8TAG6 207 aa18.24■□□□□ 0.51
RAB40B-207ENST00000572603 SELENOIQ9C0D9 397 aa18.24■□□□□ 0.51
RAB40B-207ENST00000572603 CHST6Q9GZX3 395 aa18.24■□□□□ 0.51
RAB40B-207ENST00000572603 RCC2Q9P258 522 aaKnown RBP18.24■□□□□ 0.51
RAB40B-207ENST00000572603 INSIG2Q9Y5U4 225 aa18.24■□□□□ 0.51
RAB40B-207ENST00000572603 FN1P02751 2386 aaKnown RBP18.24■□□□□ 0.51
RAB40B-207ENST00000572603 DEGS1O15121 323 aa18.23■□□□□ 0.51
RAB40B-207ENST00000572603 GABRR1P24046 479 aa18.23■□□□□ 0.51
RAB40B-207ENST00000572603 RPS27AP62979 156 aaKnown RBP18.23■□□□□ 0.51
RAB40B-207ENST00000572603 SCN1BQ07699 218 aa18.23■□□□□ 0.51
RAB40B-207ENST00000572603 KCNG3Q8TAE7 436 aa18.23■□□□□ 0.51
RAB40B-207ENST00000572603 RAB40AQ8WXH6 277 aa18.23■□□□□ 0.51
RAB40B-207ENST00000572603 CYYR1Q96J86 154 aa18.23■□□□□ 0.51
RAB40B-207ENST00000572603 TM2D1Q9BX74 207 aa18.23■□□□□ 0.51
RAB40B-207ENST00000572603 TMEM59Q9BXS4 323 aa18.23■□□□□ 0.51
RAB40B-207ENST00000572603 PPA2Q9H2U2 334 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms