RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 OR13G1Q8NGZ3 307 aa5.47□□□□□ -1.53
CHD3-213ENST00000571249 OR6X1Q8NH79 312 aa5.47□□□□□ -1.53
CHD3-213ENST00000571249 NDNFQ8TB73 568 aa5.47□□□□□ -1.53
CHD3-213ENST00000571249 Q8TCH9 128 aa5.47□□□□□ -1.53
CHD3-213ENST00000571249 S100ZQ8WXG8 99 aa5.47□□□□□ -1.53
CHD3-213ENST00000571249 RPL3LQ92901 407 aaKnown RBP5.47□□□□□ -1.53
CHD3-213ENST00000571249 NABP2Q9BQ15 211 aa5.47□□□□□ -1.53
CHD3-213ENST00000571249 ST6GALNAC5Q9BVH7 336 aa5.47□□□□□ -1.53
CHD3-213ENST00000571249 SSBP4Q9BWG4 385 aaPredicted RBP5.47□□□□□ -1.53
CHD3-213ENST00000571249 NMNAT2Q9BZQ4 307 aa5.47□□□□□ -1.53
CHD3-213ENST00000571249 WNT5BQ9H1J7 359 aa5.47□□□□□ -1.53
CHD3-213ENST00000571249 DCSTAMPQ9H295 470 aa5.47□□□□□ -1.53
CHD3-213ENST00000571249 NRIP3Q9NQ35 241 aa5.47□□□□□ -1.53
CHD3-213ENST00000571249 PCDHB16Q9NRJ7 776 aa5.47□□□□□ -1.53
CHD3-213ENST00000571249 UFSP2Q9NUQ7 469 aa5.47□□□□□ -1.53
CHD3-213ENST00000571249 CCDC59Q9P031 241 aaKnown RBP5.47□□□□□ -1.53
CHD3-213ENST00000571249 STARD10Q9Y365 291 aa5.47□□□□□ -1.53
CHD3-213ENST00000571249 A0A075B6Q4 140 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 CCDC182A6NF36 153 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 METTL15A6NJ78 407 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 RIIAD1A6NNX1 92 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 SEC14L6B5MCN3 397 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 C11orf98E9PRG8 122 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 GPX5O75715 221 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 SLC2A10O95528 541 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 CH25HO95992 272 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 IFNGP01579 166 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 HLA-DPB1P04440 258 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 ASAH2BP0C7U1 165 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 DUX4L4P0CJ87 422 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 PSMA1P25786 263 aaKnown RBP5.46□□□□□ -1.54
CHD3-213ENST00000571249 CNTFRP26992 372 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 FGF9P31371 208 aaPredicted RBP5.46□□□□□ -1.54
CHD3-213ENST00000571249 CDAP32320 146 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 ENTPD1P49961 510 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 PTTG1IPP53801 180 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 ERVK-25P63136 954 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 MAB21L1Q13394 359 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 MELKQ14680 651 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 MED22Q15528 200 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 SLC35D3Q5M8T2 416 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 OR2T2Q6IF00 324 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 PET117Q6UWS5 81 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 ACBD7Q8N6N7 88 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 SLC37A3Q8NCC5 494 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 BBS1Q8NFJ9 593 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 OR9Q1Q8NGQ5 310 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 OR51A7Q8NH64 312 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 BORCS5Q969J3 196 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 MCHR2Q969V1 340 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 CMTM3Q96MX0 182 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 HIST1H2AAQ96QV6 131 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 TEAD3Q99594 435 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 COQ7Q99807 217 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 IFT27Q9BW83 186 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 OR2H1Q9GZK4 316 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 OR51E2Q9H255 320 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 AKIP1Q9NQ31 210 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 CHCHD3Q9NX63 227 aaKnown RBP5.46□□□□□ -1.54
CHD3-213ENST00000571249 KIAA1456Q9P272 454 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 RNF7Q9UBF6 113 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 ZNF229Q9UJW7 825 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 STUB1Q9UNE7 303 aa5.46□□□□□ -1.54
CHD3-213ENST00000571249 FAT1Q14517 4588 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 TRAV27A0A087WT01 109 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 TRAV38-1A0A0B4J264 116 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 TRDV1A0A1B0GX56 115 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 OOEPA6NGQ2 149 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 MCIDASD6RGH6 385 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 ZNF670-ZNF695F2Z2N8 137 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 KPNA4O00629 521 aaPredicted RBP5.45□□□□□ -1.54
CHD3-213ENST00000571249 PLPP3O14495 311 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 MT-ATP6P00846 226 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 BGLAPP02818 100 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 IFNA6P05013 189 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 CD14P08571 375 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 ZNF3P17036 446 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 TUBG1P23258 451 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 ETV6P41212 452 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 CEBPDP49716 269 aaPredicted RBP5.45□□□□□ -1.54
CHD3-213ENST00000571249 SLC25A1P53007 311 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 RPL23AP62750 156 aaKnown RBP5.45□□□□□ -1.54
CHD3-213ENST00000571249 ACTC1P68032 377 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 ACTA1P68133 377 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 CRMP1Q14194 572 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 MPPED2Q15777 294 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 SGCAQ16586 387 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 ZNF260Q3ZCT1 412 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 SLC35D2Q76EJ3 337 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 FAM122BQ7Z309 247 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 OR2W3Q7Z3T1 314 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 Q8N1X5 172 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 C11orf42Q8N5U0 333 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 ERGIC1Q969X5 290 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 SLC25A44Q96H78 314 aaPredicted RBP5.45□□□□□ -1.54
CHD3-213ENST00000571249 SPATA25Q9BR10 227 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 HCAR1Q9BXC0 346 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 METTL8Q9H825 291 aaKnown RBP5.45□□□□□ -1.54
CHD3-213ENST00000571249 ADGRL4Q9HBW9 690 aa5.45□□□□□ -1.54
CHD3-213ENST00000571249 RETNQ9HD89 108 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms