RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 RIPPLY3P57055 190 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 TMEM33P57088 247 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 FXYD6P3P58550 94 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 PPP1CBP62140 327 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 ESRRGP62508 458 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 MRPS11P82912 194 aaKnown RBP3.13□□□□□ -1.91
NUP88-202ENST00000570937 SLC3A1Q07837 685 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 TNK1Q13470 666 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 ZNF273Q14593 569 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 ATP6AP1Q15904 470 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 CARTPTQ16568 116 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 HIGD2BQ4VC39 106 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 CCDC92Q53HC0 331 aaPredicted RBP3.13□□□□□ -1.91
NUP88-202ENST00000570937 KRBOX4Q5JUW0 171 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 C11orf71Q6IPW1 123 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 ZFP1Q6P2D0 407 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 ASRGL1Q7L266 308 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 NRARPQ7Z6K4 114 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.13□□□□□ -1.91
NUP88-202ENST00000570937 ZNF584Q8IVC4 421 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 WDFY1Q8IWB7 410 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 ZNF786Q8N393 782 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 PRSS35Q8N3Z0 413 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 SDR9C7Q8NEX9 313 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 SLC26A10Q8NG04 563 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 OR9Q2Q8NGE9 314 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 OR6K6Q8NGW6 343 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 OR1F12Q8NHA8 337 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 OR5K1Q8NHB7 308 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 STMN2Q93045 179 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 PTP4A1Q93096 173 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 APOBEC3DQ96AK3 386 aaPredicted RBP3.13□□□□□ -1.91
NUP88-202ENST00000570937 TIMD4Q96H15 378 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 CENPNQ96H22 339 aaPredicted RBP3.13□□□□□ -1.91
NUP88-202ENST00000570937 ZNF75AQ96N20 296 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 DOK1Q99704 481 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 COQ7Q99807 217 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 ATF6BQ99941 703 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 CHCHD5Q9BSY4 110 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 HCAR1Q9BXC0 346 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 HEXA-AS1Q9H8Q6 139 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 CMC2Q9NRP2 79 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 TAAR3PQ9P1P4 343 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 CYB5R1Q9UHQ9 305 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 MAP1AP78559 2803 aaPredicted RBP3.13□□□□□ -1.91
NUP88-202ENST00000570937 HRNRQ86YZ3 2850 aaPredicted RBP3.13□□□□□ -1.91
NUP88-202ENST00000570937 SPG11Q96JI7 2443 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 ABCA4P78363 2273 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 IGLV3-9A0A075B6K5 115 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 IGLV1-36A0A0B4J1U3 117 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 IGKV1D-43A0A0B4J1Z2 117 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 TRIM64A6NGJ6 449 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 TRIM64BA6NI03 449 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 SNTNA6NMZ2 147 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 F5H5K5 113 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 ZNF593O00488 134 aaPredicted RBP3.12□□□□□ -1.91
NUP88-202ENST00000570937 RER1O15258 196 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 TIMM8AO60220 97 aaPredicted RBP3.12□□□□□ -1.91
NUP88-202ENST00000570937 GPRIN2O60269 458 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 MTRF1O75570 445 aaKnown RBP3.12□□□□□ -1.91
NUP88-202ENST00000570937 MPZL1O95297 269 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 ANPEPP15144 967 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 SPI1P17947 270 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 PCMT1P22061 227 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 CFL1P23528 166 aaKnown RBP3.12□□□□□ -1.91
NUP88-202ENST00000570937 GIFP27352 417 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 HSD11B1P28845 292 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 GPR183P32249 361 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 GGT2P36268 569 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 ATP6V1E1P36543 226 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 CDX1P47902 265 aaPredicted RBP3.12□□□□□ -1.91
NUP88-202ENST00000570937 CRISP1P54107 249 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 ACTR3P61158 418 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 GRB2P62993 217 aaKnown RBP3.12□□□□□ -1.91
NUP88-202ENST00000570937 HIST1H3AP68431 136 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 CDK5Q00535 292 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 LOXL1Q08397 574 aaPredicted RBP3.12□□□□□ -1.91
NUP88-202ENST00000570937 CD300CQ08708 224 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 MZT1Q08AG7 82 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 PPP1R8Q12972 351 aaKnown RBP3.12□□□□□ -1.91
NUP88-202ENST00000570937 CRMP1Q14194 572 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 ENDOGQ14249 297 aaKnown RBP3.12□□□□□ -1.91
NUP88-202ENST00000570937 GINS1Q14691 196 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 ZNF146Q15072 292 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 PTGES3Q15185 160 aaKnown RBP3.12□□□□□ -1.91
NUP88-202ENST00000570937 SNCBQ16143 134 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 HFEQ30201 348 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 KLHL12Q53G59 568 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 TEX30Q5JUR7 227 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 HIST2H3PS2Q5TEC6 136 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 PLBD1Q6P4A8 553 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 DRAM2Q6UX65 266 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 ZNF841Q6ZN19 808 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 DNM1P46Q6ZS02 220 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 HIST2H3AQ71DI3 136 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 PGAP1Q75T13 922 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 GPR141Q7Z602 305 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 PARP8Q8N3A8 854 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 FTMTQ8N4E7 242 aa3.12□□□□□ -1.91
NUP88-202ENST00000570937 ZNF525Q8N782 197 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms