RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 TNFSF12O43508 249 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 SMAGPQ0VAQ4 97 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 FDX2Q6P4F2 183 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 OR1L1Q8NH94 360 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 KCNE4Q8WWG9 221 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 RARRES2Q99969 163 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 CLN8Q9UBY8 286 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 HSF4Q9ULV5 492 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 KLF2Q9Y5W3 355 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-216ENST00000569240 CAMTA1Q9Y6Y1 1673 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 TMEM30CPA0ZSE6 113 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 STATHP02808 62 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 DYNLT3P51808 116 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 CLDN17P56750 224 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 TWIST1Q15672 202 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 APCDD1LQ8NCL9 501 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 C17orf47Q8NEP4 570 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 CLDN23Q96B33 292 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 GALMQ96C23 342 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 OR51B2Q9Y5P1 312 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 ZNF217O75362 1048 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 KLF7O75840 302 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-216ENST00000569240 SMIM13P0DJ93 91 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 GALNSP34059 522 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 MPLP40238 635 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 PPP2CBP62714 309 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 PPP2CAP67775 309 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 TIAL1Q01085 375 aaKnown RBP eCLIP6.32□□□□□ -1.42e-6■■■■□ 22.9
CNOT1-216ENST00000569240 PMP22Q01453 160 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 HES1Q14469 280 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 OR1C1Q15619 314 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 FAM182BQ5T319 152 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 RABEPKQ7Z6M1 372 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 INSM2Q96T92 566 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-216ENST00000569240 STRADBQ9C0K7 418 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 LPAR5Q9H1C0 372 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 PRDM13Q9H4Q3 707 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 CCL27Q9Y4X3 112 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 WNT6Q9Y6F9 365 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 FGF5P12034 268 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 OR5AS1Q8N127 324 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 KLK6Q92876 244 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 GABRG3Q99928 467 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 C1QTNF6Q9BXI9 259 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 PECRQ9BY49 303 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 AAMDCQ9H7C9 122 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 DNAJC25-GNG10A0A024R161 153 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 WISP3O95389 354 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-216ENST00000569240 RNF224P0DH78 156 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 HINT1P49773 126 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-216ENST00000569240 FBLN7Q53RD9 439 aa6.32□□□□□ -1.4
CNOT1-216ENST00000569240 TMPRSS11DO60235 418 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 ASTLQ6HA08 431 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-216ENST00000569240 PQLC2Q6ZP29 291 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 CA13Q8N1Q1 262 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 TRMT61AQ96FX7 289 aaKnown RBP6.31□□□□□ -1.4
CNOT1-216ENST00000569240 C7orf71A4D174 169 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 DPRXA6NFQ7 191 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 H3BML4 177 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 EFSO43281 561 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 LEPROTL1O95214 131 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 SCGB1A1P11684 91 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 GLRA1P23415 457 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 CASP6P55212 293 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 WDR25Q64LD2 544 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-216ENST00000569240 CTU1Q7Z7A3 348 aaKnown RBP6.31□□□□□ -1.4
CNOT1-216ENST00000569240 ZDHHC23Q8IYP9 409 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 ABHD5Q8WTS1 349 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 MBD3L1Q8WWY6 194 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 ST20Q9HBF5 79 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 APOBEC3BQ9UH17 382 aaKnown RBP6.31□□□□□ -1.4
CNOT1-216ENST00000569240 OR2W1Q9Y3N9 320 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 OR5B21A6NL26 309 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 EPPINO95925 133 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 TMPRSS3P57727 454 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 FAM53BQ14153 422 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 KISS1Q15726 138 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 ZNF611Q8N823 705 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 MYEOVQ96EZ4 313 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 WDYHV1Q96HA8 205 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 MS4A6AQ9H2W1 248 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 HS3ST3A1Q9Y663 406 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 LDB3O75112 727 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 PI3P19957 117 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 LPAR6P43657 344 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 VASH2Q86V25 355 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 OR10V1Q8NGI7 309 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 ARHGAP5-AS1Q96IT6 56 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 JKAMPQ9P055 326 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 TRBV23-1A0A0A0MS06 115 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 A0A0A6YYC8 382 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-216ENST00000569240 G3V3Y1 287 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 I3L1I5 382 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-216ENST00000569240 IAPPP10997 89 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 LSM6P62312 80 aaKnown RBP6.31□□□□□ -1.4
CNOT1-216ENST00000569240 DCAF10Q5QP82 559 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 RTN4RL1Q86UN2 441 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-216ENST00000569240 D2HGDHQ8N465 521 aa6.31□□□□□ -1.4
CNOT1-216ENST00000569240 VSTM2AQ8TAG5 236 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms