RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 GOLGA8RI6L899 631 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 SAP18O00422 153 aaKnown RBP2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 UBFD1O14562 309 aaKnown RBP2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 TOR1AO14656 332 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 ERI3O43414 337 aaKnown RBP2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 SNAI2O43623 268 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 ENSAO43768 121 aaKnown RBP2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 TNFSF13O75888 250 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 RCBTB2O95199 551 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 VENTXO95231 258 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 SOD3P08294 240 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 SNRPCP09234 159 aaKnown RBP2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 DNAH10OSP0CZ25 163 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 SMIM10L1P0DMW3 83 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 AZU1P20160 251 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 CRYGSP22914 178 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 HTR2CP28335 458 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 IL12AP29459 219 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 UGT2B10P36537 528 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 CD79BP40259 229 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 CRATP43155 626 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 CSNK1A1P48729 337 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 CDK9P50750 372 aaKnown RBP2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 RAB7AP51149 207 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 CCR8P51685 355 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 RIDAP52758 137 aaKnown RBP2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 OR2B6P58173 313 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 UBE2G2P60604 165 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 DEFA6Q01524 100 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 ACVR1Q04771 509 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 STX4Q12846 297 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 ECH1Q13011 328 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 SERTAD2Q14140 314 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 TRIP13Q15645 432 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 NNATQ16517 81 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 RPEL1Q2QD12 228 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 NDUFAF6Q330K2 333 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 RNF212Q495C1 297 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 PIGGQ5H8A4 983 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 C6orf52Q5T4I8 152 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 OPN5Q6U736 354 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 C12orf54Q6X4T0 127 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 Q6ZN92 141 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 PLCZ1Q86YW0 608 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 LRRC25Q8N386 305 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 CYB561A3Q8NBI2 242 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 NT5CQ8TCD5 201 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 C17orf50Q8WW18 174 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 C1orf54Q8WWF1 131 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 LRRC45Q96CN5 670 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 STARD4Q96DR4 205 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 SMIM10Q96HG1 83 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 RILPQ96NA2 401 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 FAM210AQ96ND0 272 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 SORT1Q99523 831 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 NAT9Q9BTE0 207 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 MAP1LC3CQ9BXW4 147 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 ANGPTL4Q9BY76 406 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 FOLH1BQ9HBA9 442 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 ZNF226Q9NYT6 803 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 SLC17A7Q9P2U7 560 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 ABCD2Q9UBJ2 740 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 CLEC2DQ9UHP7 191 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 BOKQ9UMX3 212 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 CHCHD2Q9Y6H1 151 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 CDH10Q9Y6N8 788 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 TENM1Q9UKZ4 2725 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 MALRD1Q5VYJ5 2156 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 ATRQ13535 2644 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 HIVEP2P31629 2446 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 USF3Q68DE3 2245 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 PRR14LQ5THK1 2151 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 SONP18583 2426 aaKnown RBP2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 IGKV1D-8A0A087WSZ0 117 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 B4DXG7 233 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 LOC110117498-PIK3R3F6TDL0 507 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 GOLGA8MH3BSY2 632 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 SLC17A2O00624 439 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 DYNC1I1O14576 645 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 XRCC2O43543 280 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 SOX15O60248 233 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 CTNSO60931 367 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 SLC2A10O95528 541 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 OXTP01178 125 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 IGKV3-15P01624 115 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 IGHV2-5P01817 119 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 HPNP05981 417 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 C2P06681 752 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 MPC1LP0DKB6 136 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 CT45A10P0DMU9 189 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 ZNF250P15622 560 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 RPS3P23396 243 aaKnown RBP eCLIP2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 RBM34P42696 430 aaKnown RBP2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 RPL29P47914 159 aaKnown RBP2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 SERPINB8P50452 374 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 DIO3P55073 304 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 RAB38P57729 211 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 BASP1P80723 227 aaKnown RBP2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 PAX2Q02962 417 aa2.47□□□□□ -2.01
HMGB1P6-201ENST00000569046 RELAQ04206 551 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms