RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 TPRA1Q86W33 373 aa6.77□□□□□ -1.33
CDH13-208ENST00000566333 OSR2Q8N2R0 312 aa6.77□□□□□ -1.33
CDH13-208ENST00000566333 ZNRF1Q8ND25 227 aa6.77□□□□□ -1.33
CDH13-208ENST00000566333 NDNFQ8TB73 568 aa6.77□□□□□ -1.33
CDH13-208ENST00000566333 FAM46BQ96A09 425 aa6.77□□□□□ -1.33
CDH13-208ENST00000566333 SSBP3Q9BWW4 388 aaPredicted RBP6.77□□□□□ -1.33
CDH13-208ENST00000566333 METTL9Q9H1A3 318 aa6.77□□□□□ -1.33
CDH13-208ENST00000566333 BANF2Q9H503 90 aa6.77□□□□□ -1.33
CDH13-208ENST00000566333 IFT22Q9H7X7 185 aa6.77□□□□□ -1.33
CDH13-208ENST00000566333 ELL3Q9HB65 397 aaPredicted RBP6.77□□□□□ -1.33
CDH13-208ENST00000566333 PLGRKTQ9HBL7 147 aa6.77□□□□□ -1.33
CDH13-208ENST00000566333 LPAR2Q9HBW0 351 aa6.77□□□□□ -1.33
CDH13-208ENST00000566333 RCC2Q9P258 522 aaKnown RBP6.77□□□□□ -1.33
CDH13-208ENST00000566333 STEAP1Q9UHE8 339 aa6.77□□□□□ -1.33
CDH13-208ENST00000566333 PCDHB10Q9UN67 800 aa6.77□□□□□ -1.33
CDH13-208ENST00000566333 GSTK1Q9Y2Q3 226 aa6.77□□□□□ -1.33
CDH13-208ENST00000566333 A0A0A6YYD4 124 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 TRAV24A0A0B4J272 114 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 TMEM272A0A1B0GTI8 110 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 B4DSR2 109 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 SIRPB1O00241 398 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 SLC33A1O00400 549 aaPredicted RBP6.76□□□□□ -1.33
CDH13-208ENST00000566333 PDCD5O14737 125 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 GEMIN2O14893 280 aaKnown RBP6.76□□□□□ -1.33
CDH13-208ENST00000566333 CD5LO43866 347 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 ZNF780AO75290 641 aaPredicted RBP6.76□□□□□ -1.33
CDH13-208ENST00000566333 UBBP0CG47 229 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 LMO1P25800 156 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 GABRA2P47869 451 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 BMXP51813 675 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 EFNB2P52799 333 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 GNB2P62879 340 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 RPS27AP62979 156 aaKnown RBP6.76□□□□□ -1.33
CDH13-208ENST00000566333 MXD1Q05195 221 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 PDCD1Q15116 288 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 ESCO2Q56NI9 601 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 SIGIRRQ6IA17 410 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 METAP1DQ6UB28 335 aaPredicted RBP6.76□□□□□ -1.33
CDH13-208ENST00000566333 FIP1L1Q6UN15 594 aaKnown RBP6.76□□□□□ -1.33
CDH13-208ENST00000566333 TCF23Q7RTU1 214 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 SLC36A1Q7Z2H8 476 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 OR2W3Q7Z3T1 314 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 CLVS1Q8IUQ0 354 aaPredicted RBP6.76□□□□□ -1.33
CDH13-208ENST00000566333 OR8H2Q8N162 312 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 ZNF561Q8N587 486 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 LINC01356Q8N9X3 169 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 TMEM185AQ8NFB2 350 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 OR4S1Q8NGB4 309 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 OR51D1Q8NGF3 324 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 FAM3DQ96BQ1 224 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 NICN1Q9BSH3 213 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 BARHL1Q9BZE3 327 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 CHST6Q9GZX3 395 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 SHARPINQ9H0F6 387 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 LIN7BQ9HAP6 207 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 MMP26Q9NRE1 261 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 GHRLQ9UBU3 117 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 SLC25A10Q9UBX3 287 aaPredicted RBP6.76□□□□□ -1.33
CDH13-208ENST00000566333 FBLN5Q9UBX5 448 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 CLN8Q9UBY8 286 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 OR5V1Q9UGF6 321 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 ING4Q9UNL4 249 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 ST3GAL6Q9Y274 331 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 CUBNO60494 3623 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 JMJD1CQ15652 2540 aa6.76□□□□□ -1.33
CDH13-208ENST00000566333 PPIAL4CA0A0B4J2A2 164 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 IGHV2-70DA0A0C4DH43 119 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 FOXI3A8MTJ6 420 aaPredicted RBP6.75□□□□□ -1.33
CDH13-208ENST00000566333 K7N7A8 449 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 FOXH1O75593 365 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 CRTAPO75718 401 aaPredicted RBP6.75□□□□□ -1.33
CDH13-208ENST00000566333 MPIG6BO95866 241 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 LY6G6DO95868 133 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 IL1AP01583 271 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 CSTBP04080 98 aaKnown RBP6.75□□□□□ -1.33
CDH13-208ENST00000566333 TK1P04183 234 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 CSN2P05814 226 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 HEXAP06865 529 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 GTF2F2P13984 249 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 ARSBP15848 533 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 RPS19P39019 145 aaKnown RBP6.75□□□□□ -1.33
CDH13-208ENST00000566333 NPY4RP50391 375 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 PSMD7P51665 324 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 CAPZA1P52907 286 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 BLMHQ13867 455 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 GPR176Q14439 515 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 SPCS2Q15005 226 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 TAF9Q16594 264 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 MPV17LQ2QL34 196 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 LINC00596Q86U02 117 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 ASCC1Q8N9N2 400 aaKnown RBP6.75□□□□□ -1.33
CDH13-208ENST00000566333 CHST4Q8NCG5 386 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 C8orf46Q8TAG6 207 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 LGALS14Q8TCE9 139 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 RAB2BQ8WUD1 216 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 ST8SIA4Q92187 359 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 SLC25A46Q96AG3 418 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 TMEM186Q96B77 213 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 ISOC1Q96CN7 298 aa6.75□□□□□ -1.33
CDH13-208ENST00000566333 SLC25A38Q96DW6 304 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms