RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 FAM90A16PA6NEW6 464 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 FAM90A20PA6NIJ5 464 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 FAM90A8PA6NJQ4 464 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 FAM90A7PA6NKC0 464 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 FOXI3A8MTJ6 420 aaPredicted RBP9.31□□□□□ -0.92
SF3B3-205ENST00000564899 FAM90A22PA8MWA6 464 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 FAM90A12PA8MX19 464 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 FAM90A5PA8MXJ8 464 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 FAM90A23PA8MXZ1 464 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 H7C417 338 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 IFNL4K9M1U5 179 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 TPPPO94811 219 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 KNG1P01042 644 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 HLA-DQB1P01920 261 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 FAM90A15PP0C7V4 464 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 FAM90A13PP0C7W8 464 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 FAM90A14PP0C7W9 464 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 FAM90A24PP0C7X0 464 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 HIST1H1DP16402 221 aaKnown RBP9.31□□□□□ -0.92
SF3B3-205ENST00000564899 DUSP1P28562 367 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 CD80P33681 288 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 RBMXP38159 391 aaKnown RBP9.31□□□□□ -0.92
SF3B3-205ENST00000564899 CDKN1AP38936 164 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 IKZF1Q13422 519 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 PDCD1Q15116 288 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 ZNF181Q2M3W8 571 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 SPIN3Q5JUX0 258 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 Q6ZTK2 550 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 RTN4RL2Q86UN3 420 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 C1orf87Q8N0U7 546 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 GDPD1Q8N9F7 314 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 SPATA3Q8NHX4 192 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 NEU4Q8WWR8 484 aaPredicted RBP9.31□□□□□ -0.92
SF3B3-205ENST00000564899 CCL17Q92583 94 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 ARHGAP5-AS1Q96IT6 56 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 COX4I2Q96KJ9 171 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 NEDD4LQ96PU5 975 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 ABHD1Q96SE0 405 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 AUNIPQ9H7T9 357 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 ZMAT3Q9HA38 289 aaKnown RBP9.31□□□□□ -0.92
SF3B3-205ENST00000564899 RASL12Q9NYN1 266 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 DNAJB11Q9UBS4 358 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 CACNG2Q9Y698 323 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 TMEM235A6NFC5 223 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 H3BUI4 141 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.3□□□□□ -0.92
SF3B3-205ENST00000564899 H7C1Q1 480 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 SMAD7O15105 426 aaKnown RBP9.3□□□□□ -0.92
SF3B3-205ENST00000564899 PDCD6O75340 191 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 HAND1O96004 215 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 LHBP01229 141 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 PTHLHP12272 177 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 ZNF44P15621 663 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 GNB3P16520 340 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 CHATP28329 748 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 TMEM50BP56557 158 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 SCN1BQ07699 218 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 ARL6IP1Q15041 203 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 ZNF146Q15072 292 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 ZNF260Q3ZCT1 412 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 CDNFQ49AH0 187 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 RNASE12Q5GAN4 147 aaKnown RBP9.3□□□□□ -0.92
SF3B3-205ENST00000564899 PLAC9Q5JTB6 97 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 FAM201AQ5SY85 155 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 ATAD3CQ5T2N8 411 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 SIGIRRQ6IA17 410 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 FAM90A1Q86YD7 464 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 Q8N402 240 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 GCDHQ92947 438 aaPredicted RBP9.3□□□□□ -0.92
SF3B3-205ENST00000564899 BORCS5Q969J3 196 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 SEH1LQ96EE3 360 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 CCL19Q99731 98 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 CCDC32Q9BV29 185 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 PECRQ9BY49 303 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 SPACA1Q9HBV2 294 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 TMEM106BQ9NUM4 274 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 PLEKHJ1Q9NW61 149 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 DCAF16Q9NXF7 216 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 ZNF581Q9P0T4 197 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 NLKQ9UBE8 527 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 OR14J1Q9UGF5 321 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 GLS2Q9UI32 602 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 WIPI2Q9Y4P8 454 aa9.3□□□□□ -0.92
SF3B3-205ENST00000564899 IGHV3OR15-7A0A075B7D8 119 aa9.29□□□□□ -0.92
SF3B3-205ENST00000564899 OOEPA6NGQ2 149 aa9.29□□□□□ -0.92
SF3B3-205ENST00000564899 TMEM178BH3BS89 294 aa9.29□□□□□ -0.92
SF3B3-205ENST00000564899 SIRPB1O00241 398 aa9.29□□□□□ -0.92
SF3B3-205ENST00000564899 MFNGO00587 321 aa9.29□□□□□ -0.92
SF3B3-205ENST00000564899 DEGS1O15121 323 aa9.29□□□□□ -0.92
SF3B3-205ENST00000564899 CTDSPLO15194 276 aa9.29□□□□□ -0.92
SF3B3-205ENST00000564899 GSTP1P09211 210 aaKnown RBP9.29□□□□□ -0.92
SF3B3-205ENST00000564899 FUT3P21217 361 aa9.29□□□□□ -0.92
SF3B3-205ENST00000564899 PRSS3P35030 304 aa9.29□□□□□ -0.92
SF3B3-205ENST00000564899 MRPS10P82664 201 aaKnown RBP9.29□□□□□ -0.92
SF3B3-205ENST00000564899 HFEQ30201 348 aa9.29□□□□□ -0.92
SF3B3-205ENST00000564899 Q6P435 159 aa9.29□□□□□ -0.92
SF3B3-205ENST00000564899 C16orf87Q6PH81 154 aa9.29□□□□□ -0.92
SF3B3-205ENST00000564899 C6orf201Q7Z4U5 140 aa9.29□□□□□ -0.92
SF3B3-205ENST00000564899 OR8H2Q8N162 312 aa9.29□□□□□ -0.92
SF3B3-205ENST00000564899 C19orf18Q8NEA5 215 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms