RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 UPK3AO75631 287 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 CD3EP07766 207 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 CSF3P09919 207 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 CTSSP25774 331 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 ZNF83P51522 516 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 IQCJQ1A5X6 159 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 LCN10Q6JVE6 187 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 CD200R1LQ6Q8B3 271 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 PRR18Q8N4B5 295 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 BVESQ8NE79 360 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 TMEM54Q969K7 222 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 SLC7A10Q9NS82 523 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 GAB2Q9UQC2 676 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 A0A0D9SG52 128 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 A8MXE2 369 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 DLL1O00548 723 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 KCNMB1Q16558 191 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 BEX5Q5H9J7 111 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 LINC01590Q5TEZ4 76 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 AADACL3Q5VUY0 350 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 ZPLD1Q8TCW7 415 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 COA4Q9NYJ1 87 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 FLVCR2Q9UPI3 526 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 PDCD6O75340 191 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 CA11O75493 328 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 MT-ND4LP03901 98 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 CHATP28329 748 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 KLRB1Q12918 225 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 INPP5JQ15735 1006 aaPredicted RBP6.62□□□□□ -1.35
TCF4-216ENST00000562680 COL5A1-AS1Q5SY13 56 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 OTPQ5XKR4 325 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 OR2T2Q6IF00 324 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 OR5A2Q8NGI9 324 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 MTFP1Q9UDX5 166 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 OR5V1Q9UGF6 321 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 LOC102724200A0A096LPH7 203 aaPredicted RBP6.61□□□□□ -1.35
TCF4-216ENST00000562680 TRBV5-5A0A0J9YX44 114 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 HIST1H1DP16402 221 aaKnown RBP6.61□□□□□ -1.35
TCF4-216ENST00000562680 S100A7P31151 101 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 NBL1P41271 181 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 SLC36A1Q7Z2H8 476 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 DMRTA2Q96SC8 542 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 MIXL1Q9H2W2 232 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 OPN4Q9UHM6 478 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 FOXD3Q9UJU5 478 aaPredicted RBP6.61□□□□□ -1.35
TCF4-216ENST00000562680 SERTM2A0A1B0GWG4 89 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 TMEM30CPA0ZSE6 113 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 J3QT63 122 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 ZIC3O60481 467 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 ZNF708P17019 499 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 TGFBR1P36897 503 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 EDDM3BP56851 147 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 C3AR1Q16581 482 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 OR52W1Q6IF63 320 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 LINC00596Q86U02 117 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 THNSL2Q86YJ6 484 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 FAM58AQ8N1B3 248 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 SECTM1Q8WVN6 248 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 MS4A3Q96HJ5 214 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 ZNF48Q96MX3 618 aaPredicted RBP6.61□□□□□ -1.35
TCF4-216ENST00000562680 SPACA5Q96QH8 159 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 UBL7Q96S82 380 aaPredicted RBP6.61□□□□□ -1.35
TCF4-216ENST00000562680 HRASLSQ9HDD0 168 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 KPTNQ9Y664 436 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 A0A1B0GUH1 482 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 LYPD3O95274 346 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 TSPAN15O95858 294 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 COMPP49747 757 aaPredicted RBP6.61□□□□□ -1.35
TCF4-216ENST00000562680 MPV17LQ2QL34 196 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 ZNF468Q5VIY5 522 aaPredicted RBP6.61□□□□□ -1.35
TCF4-216ENST00000562680 MEX3BQ6ZN04 569 aaKnown RBP6.61□□□□□ -1.35
TCF4-216ENST00000562680 BTLAQ7Z6A9 289 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 LRRC75AQ8NAA5 344 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 C1orf162Q8NEQ5 155 aaPredicted RBP6.61□□□□□ -1.35
TCF4-216ENST00000562680 OR51S1Q8NGJ8 323 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 CITED2Q99967 270 aaPredicted RBP6.61□□□□□ -1.35
TCF4-216ENST00000562680 MS4A7Q9GZW8 240 aaPredicted RBP6.61□□□□□ -1.35
TCF4-216ENST00000562680 MYOZ1Q9NP98 299 aaPredicted RBP6.61□□□□□ -1.35
TCF4-216ENST00000562680 LAMP3Q9UQV4 416 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 ACACAQ13085 2346 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 LY6G6EA0A0G2JKS1 128 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 SIGLEC5O15389 551 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 GSTZ1O43708 216 aaPredicted RBP6.61□□□□□ -1.35
TCF4-216ENST00000562680 TDGF1P13385 188 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 RPL29P47914 159 aaKnown RBP6.61□□□□□ -1.35
TCF4-216ENST00000562680 ID4P47928 161 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 TNFRSF9Q07011 255 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 MOGAT2Q3SYC2 334 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 C16orf54Q6UWD8 224 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 PRSS45Q7RTY3 260 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 MFSD4AQ8N468 514 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 CMBLQ96DG6 245 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 DIRC2Q96SL1 478 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 SULT4A1Q9BR01 284 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 PLEKHB1Q9UF11 243 aaPredicted RBP6.61□□□□□ -1.35
TCF4-216ENST00000562680 U3KQA8 63 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 F6UZH7 168 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 M0QYG6 137 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 MSTNO14793 375 aa6.61□□□□□ -1.35
TCF4-216ENST00000562680 PDZD11Q5EBL8 140 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms