RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 ITPR3Q14573 2671 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 A0A0U1RQV5 110 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 TMEM269A0A1B0GVZ9 245 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 A0A1W2PPI3 338 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 OR4C45A6NMZ5 311 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 CD300LBA8K4G0 201 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 FAM90A26D6RGX4 464 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 ZNF670-ZNF695F2Z2N8 137 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 M0R233 179 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 SLC1A7O00341 560 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 XRCC2O43543 280 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 CRLF1O75462 422 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 CRHBPP24387 322 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 COL8A2P25067 703 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 HSD11B1P28845 292 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 PSMB10P40306 273 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 CCR9P51686 369 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 RIDAP52758 137 aaKnown RBP3.76□□□□□ -1.81
SMG1-206ENST00000562668 EFNA4P52798 201 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 SNRPD2P62316 118 aaKnown RBP3.76□□□□□ -1.81
SMG1-206ENST00000562668 ACTC1P68032 377 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 ACTA1P68133 377 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 MAB21L1Q13394 359 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 OR2G6Q5TZ20 316 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 TMEM42Q69YG0 159 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 ASPHD2Q6ICH7 369 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 ARL9Q6T311 187 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 SPNS3Q6ZMD2 512 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 KRT77Q7Z794 578 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 WDR86Q86TI4 376 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 LHFPL3Q86UP9 236 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 GTSCR1Q86UQ5 136 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 TGIF2LYQ8IUE0 185 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 C11orf53Q8IXP5 236 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 SYS1Q8N2H4 156 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 ZNF283Q8N7M2 679 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 WFDC11Q8NEX6 87 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 OR8G5Q8NG78 346 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 OR52H1Q8NGJ2 320 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 RGP1Q92546 391 aaPredicted RBP3.76□□□□□ -1.81
SMG1-206ENST00000562668 YIPF5Q969M3 257 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 PHF21AQ96BD5 680 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 RRNAD1Q96FB5 475 aaKnown RBP3.76□□□□□ -1.81
SMG1-206ENST00000562668 PERPQ96FX8 193 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 REEP6Q96HR9 211 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 ZNF184Q99676 751 aaPredicted RBP3.76□□□□□ -1.81
SMG1-206ENST00000562668 PYGO2Q9BRQ0 406 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 MROQ9BYG7 248 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 PBOV1Q9GZY1 135 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 VCXQ9H320 206 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 INPP5EQ9NRR6 644 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 CNOT2Q9NZN8 540 aaKnown RBP3.76□□□□□ -1.81
SMG1-206ENST00000562668 OR52A1Q9UKL2 312 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 SLC22A13Q9Y226 551 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 CACNG2Q9Y698 323 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 V9GYS6 101 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 MAST4O15021 2626 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 MYO9AB2RTY4 2548 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 SVEP1Q4LDE5 3571 aa3.76□□□□□ -1.81
SMG1-206ENST00000562668 ABCA2Q9BZC7 2435 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 IGHV4-30-2A0A087WSY4 118 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 A0A1W2PP11 408 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 A0A1W2PPW3 197 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 LOC390937A0A1W2PQ73 354 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 DAPL1A0PJW8 107 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 SNTNA6NMZ2 147 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 LOC110117498-PIK3R3F6TDL0 507 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 LYNX1G3V0Z9 82 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 TMEM178BH3BS89 294 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 OGG1O15527 345 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 RPP14O95059 124 aaKnown RBP3.75□□□□□ -1.81
SMG1-206ENST00000562668 FADS2O95864 444 aaKnown RBP3.75□□□□□ -1.81
SMG1-206ENST00000562668 CST4P01036 141 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 APOC1P02654 83 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 HLA-DPB1P04440 258 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 ISG15P05161 165 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 KRT8P05787 483 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 CDK1P06493 297 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 CCDC159P0C7I6 412 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 LYNX1P0DP58 116 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 SELEP16581 610 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 GIFP27352 417 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 DCKP27707 260 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 GCH1P30793 250 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 PMELP40967 661 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 CD200P41217 278 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 CRYBB2P43320 205 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 HSPA13P48723 471 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 TGM4P49221 684 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 GTF2A1P52655 376 aaPredicted RBP3.75□□□□□ -1.81
SMG1-206ENST00000562668 ATP5J2P56134 94 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 RPS11P62280 158 aaKnown RBP eCLIP3.75□□□□□ -1.81
SMG1-206ENST00000562668 MRPS11P82912 194 aaKnown RBP3.75□□□□□ -1.81
SMG1-206ENST00000562668 ACSM1Q08AH1 577 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 ST3GAL4Q11206 333 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 TAF13Q15543 124 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 SNCBQ16143 134 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 AHSA2Q719I0 299 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 PGAP1Q75T13 922 aa3.75□□□□□ -1.81
SMG1-206ENST00000562668 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms