RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 RFXANKO14593 260 aa3.5□□□□□ -1.85
SMG1-204ENST00000561940 GATBO75879 557 aaKnown RBP3.5□□□□□ -1.85
SMG1-204ENST00000561940 RPN2P04844 631 aa3.5□□□□□ -1.85
SMG1-204ENST00000561940 TPM1P09493 284 aa3.5□□□□□ -1.85
SMG1-204ENST00000561940 SLC35G6P0C7Q6 338 aa3.5□□□□□ -1.85
SMG1-204ENST00000561940 HTR2CP28335 458 aa3.5□□□□□ -1.85
SMG1-204ENST00000561940 PCK1P35558 622 aa3.5□□□□□ -1.85
SMG1-204ENST00000561940 FKBP1AP62942 108 aaKnown RBP3.5□□□□□ -1.85
SMG1-204ENST00000561940 ST3GAL4Q11206 333 aa3.5□□□□□ -1.85
SMG1-204ENST00000561940 FAM58AQ8N1B3 248 aa3.5□□□□□ -1.85
SMG1-204ENST00000561940 ZNF561Q8N587 486 aa3.5□□□□□ -1.85
SMG1-204ENST00000561940 TMEM105Q8N8V8 129 aa3.5□□□□□ -1.85
SMG1-204ENST00000561940 OR10Z1Q8NGY1 313 aa3.5□□□□□ -1.85
SMG1-204ENST00000561940 UTP23Q9BRU9 249 aaKnown RBP3.5□□□□□ -1.85
SMG1-204ENST00000561940 ZSCAN16Q9H4T2 348 aaPredicted RBP3.5□□□□□ -1.85
SMG1-204ENST00000561940 ANKHQ9HCJ1 492 aa3.5□□□□□ -1.85
SMG1-204ENST00000561940 TAS2R5Q9NYW4 299 aa3.5□□□□□ -1.85
SMG1-204ENST00000561940 V9GYY9 64 aa3.5□□□□□ -1.85
SMG1-204ENST00000561940 MYO9BQ13459 2157 aa3.5□□□□□ -1.85
SMG1-204ENST00000561940 TICRRQ7Z2Z1 1910 aa3.5□□□□□ -1.85
SMG1-204ENST00000561940 GVINP1Q7Z2Y8 2422 aa3.5□□□□□ -1.85
SMG1-204ENST00000561940 IGLV3-12A0A075B6K2 115 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 TRAV8-7A0A075B6U6 113 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 IGHV6-1A0A0B4J1U7 121 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 TRAV8-4A0A0B4J246 113 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 TRAV40A0A0B4J280 105 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 IGHV1-3A0A0C4DH29 117 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 BTNL10A8MVZ5 291 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 FAM25EA8MYX2 175 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 J3QT63 122 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 LGALS9O00182 355 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 POLR1CO15160 346 aaPredicted RBP3.49□□□□□ -1.85
SMG1-204ENST00000561940 P01737 135 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 CD28P10747 220 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 TGFBR1P36897 503 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 TMED1Q13445 227 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 TAL2Q16559 108 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 MFSD14CQ5VZR4 134 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 SLC7A5P1Q8MH63 180 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 RNF182Q8N6D2 247 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 LRRC52Q8N7C0 313 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 SPANXA2-OT1Q8N9U9 137 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 LRRC39Q96DD0 335 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 CFAP53Q96M91 514 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 ZFP3Q96NJ6 502 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 XKR8Q9H6D3 395 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 CA10Q9NS85 328 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 MAST4O15021 2626 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 THADAQ6YHU6 1953 aa3.49□□□□□ -1.85
SMG1-204ENST00000561940 DUOX1Q9NRD9 1551 aa3.48□□□□□ -1.85
SMG1-204ENST00000561940 TRAV8-6A0A0B4J262 113 aa3.48□□□□□ -1.85
SMG1-204ENST00000561940 NDUFS8O00217 210 aa3.48□□□□□ -1.85
SMG1-204ENST00000561940 ALOX12BO75342 701 aa3.48□□□□□ -1.85
SMG1-204ENST00000561940 CDRT1O95170 752 aa3.48□□□□□ -1.85
SMG1-204ENST00000561940 IL3RAP26951 378 aa3.48□□□□□ -1.85
SMG1-204ENST00000561940 MTPNP58546 118 aa3.48□□□□□ -1.85
SMG1-204ENST00000561940 DYNC1I2Q13409 638 aaKnown RBP3.48□□□□□ -1.85
SMG1-204ENST00000561940 FAM27D1Q5T7N8 215 aa3.48□□□□□ -1.85
SMG1-204ENST00000561940 FKBP1CQ5VVH2 108 aa3.48□□□□□ -1.85
SMG1-204ENST00000561940 DEGS2Q6QHC5 323 aa3.48□□□□□ -1.85
SMG1-204ENST00000561940 NEGR1Q7Z3B1 354 aa3.48□□□□□ -1.85
SMG1-204ENST00000561940 GATSQ8NAP1 163 aa3.48□□□□□ -1.85
SMG1-204ENST00000561940 OR2Z1Q8NG97 314 aa3.48□□□□□ -1.85
SMG1-204ENST00000561940 OR4M2Q8NGB6 313 aa3.48□□□□□ -1.85
SMG1-204ENST00000561940 OR1S1Q8NH92 325 aa3.48□□□□□ -1.85
SMG1-204ENST00000561940 RTN4IP1Q8WWV3 396 aaPredicted RBP3.48□□□□□ -1.85
SMG1-204ENST00000561940 WDR34Q96EX3 536 aa3.48□□□□□ -1.85
SMG1-204ENST00000561940 SMARCD1Q96GM5 515 aa3.48□□□□□ -1.85
SMG1-204ENST00000561940 PORCNQ9H237 461 aa3.48□□□□□ -1.85
SMG1-204ENST00000561940 KIAA1671Q9BY89 1806 aa3.48□□□□□ -1.85
SMG1-204ENST00000561940 ALPK3Q96L96 1907 aa3.48□□□□□ -1.85
SMG1-204ENST00000561940 MED23Q9ULK4 1368 aa3.48□□□□□ -1.85
SMG1-204ENST00000561940 SETXQ7Z333 2677 aaKnown RBP3.47□□□□□ -1.85
SMG1-204ENST00000561940 C5orf42Q9H799 3197 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 CFAP47Q6ZTR5 3102 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 IGLV2-18A0A075B6J9 118 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 A0A1W2PQ67 120 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 GSTTP1A0A1W2PQM5 241 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 MYL12BO14950 172 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 RBBP9O75884 186 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 RHOCP08134 193 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 LIPCP11150 499 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 IL9P15248 144 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 ETV1P50549 477 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 TAS2R43P59537 309 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 C2orf54Q08AI8 447 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 KLHL12Q53G59 568 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 AADACL4Q5VUY2 407 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 PID1Q7Z2X4 250 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 LINC00469Q8N7U9 141 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 DEDD2Q8WXF8 326 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 TSNAXQ99598 290 aaKnown RBP3.47□□□□□ -1.85
SMG1-204ENST00000561940 RHOXF2Q9BQY4 288 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 SIKE1Q9BRV8 207 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 HINT2Q9BX68 163 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 BEX2Q9BXY8 128 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 ZNF717Q9BY31 904 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms