RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 PAHP00439 452 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 MMP9P14780 707 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 HILS1P60008 231 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 SLC35A2P78381 396 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 DOC2BQ14184 412 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 INSL4Q14641 139 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 SLC22A6Q4U2R8 563 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 ACSM3Q53FZ2 586 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 TMEM200BQ69YZ2 307 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 ASPHD2Q6ICH7 369 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 LY6G5BQ8NDX9 201 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 OR4S1Q8NGB4 309 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 OR5D13Q8NGL4 314 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 PPP1R35Q8TAP8 253 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 UFD1Q92890 307 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 GCDHQ92947 438 aaPredicted RBP8.32□□□□□ -1.08
HERC1-212ENST00000561348 MUL1Q969V5 352 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 SNX22Q96L94 193 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 PGLYRP3Q96LB9 341 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 NOX4Q9NPH5 578 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 ESM1Q9NQ30 184 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 BLOC1S6Q9UL45 172 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 RAB26Q9ULW5 256 aa8.32□□□□□ -1.08
HERC1-212ENST00000561348 A0A0A6YYJ9 748 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 A0A0U1RQK1 487 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 MAGEA13PA6NCF6 341 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 HOXA3O43365 443 aaPredicted RBP8.31□□□□□ -1.08
HERC1-212ENST00000561348 KDM4BO94953 1096 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 CRHBPP24387 322 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 PTGFRP43088 359 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 ZP1P60852 638 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 RPS11P62280 158 aaKnown RBP eCLIP8.31□□□□□ -1.08
HERC1-212ENST00000561348 AESQ08117 197 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 DYNC1I2Q13409 638 aaKnown RBP8.31□□□□□ -1.08
HERC1-212ENST00000561348 ZNF273Q14593 569 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 ATXN7L3Q14CW9 347 aaPredicted RBP8.31□□□□□ -1.08
HERC1-212ENST00000561348 PIGYQ3MUY2 71 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 SPIN3Q5JUX0 258 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 RBM48Q5RL73 367 aaKnown RBP8.31□□□□□ -1.08
HERC1-212ENST00000561348 AWAT2Q6E213 333 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 CEACAM19Q7Z692 300 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 OR8H2Q8N162 312 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 Q8N7P7 452 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 ZDHHC22Q8N966 263 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 ZNF485Q8NCK3 441 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 NEK7Q8TDX7 302 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 TAF15Q92804 592 aaKnown RBP eCLIP8.31□□□□□ -1.08
HERC1-212ENST00000561348 SLC25A28Q96A46 364 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 CDCA4Q9BXL8 241 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 FAM234AQ9H0X4 552 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 METTL9Q9H1A3 318 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 METTL8Q9H825 291 aaKnown RBP8.31□□□□□ -1.08
HERC1-212ENST00000561348 TCF7L1Q9HCS4 588 aa8.31□□□□□ -1.08
HERC1-212ENST00000561348 MRPS28Q9Y2Q9 187 aaKnown RBP8.31□□□□□ -1.08
HERC1-212ENST00000561348 FBN1P35555 2871 aaKnown RBP8.3□□□□□ -1.08
HERC1-212ENST00000561348 COL6A5A8TX70 2615 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 TRBV5-5A0A0J9YX44 114 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 hADV38S2A0JD32 116 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 FAM172BPA6NC97 362 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 RNASEK-C17orf49H0YIS7 233 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 M0R1W7 72 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 NPFFO15130 113 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 PSPNO60542 156 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 ZNF737O75373 536 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 PAX6P26367 422 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 MAPK3P27361 379 aaPredicted RBP8.3□□□□□ -1.08
HERC1-212ENST00000561348 MTNR1BP49286 362 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 LGALS4P56470 323 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 UBA52P62987 128 aaKnown RBP8.3□□□□□ -1.08
HERC1-212ENST00000561348 C11orf91Q3C1V1 193 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 PLA1AQ53H76 456 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 PAN3Q58A45 887 aaKnown RBP8.3□□□□□ -1.08
HERC1-212ENST00000561348 ATAD3CQ5T2N8 411 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 FAM27D1Q5T7N8 215 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 NCR3LG1Q68D85 454 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 C17orf107Q6ZR85 190 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 SAXO1Q8IYX7 474 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 MS4A15Q8N5U1 240 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 KIR3DL3Q8N743 410 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 C8orf46Q8TAG6 207 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 TBC1D15Q8TC07 691 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 RPS4Y2Q8TD47 263 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 DERL3Q96Q80 235 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 DUSP21Q9H596 190 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 ST3GAL6Q9Y274 331 aa8.3□□□□□ -1.08
HERC1-212ENST00000561348 SF3B6Q9Y3B4 125 aaKnown RBP8.3□□□□□ -1.08
HERC1-212ENST00000561348 A0A0G2JK05 382 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 A0A1W2PP11 408 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 FUOMA2VDF0 154 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 MGST3O14880 152 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 PIN1P1O15428 100 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 CRTAPO75718 401 aaPredicted RBP8.29□□□□□ -1.08
HERC1-212ENST00000561348 OR7C1O76099 320 aaPredicted RBP8.29□□□□□ -1.08
HERC1-212ENST00000561348 ALX3O95076 343 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 ALDOBP05062 364 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 CRYBA1P05813 215 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 ZNF728P0DKX0 622 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 OMGP23515 440 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 PRTN3P24158 256 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 SAA4P35542 130 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms