RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 CCDC190Q86UF4 302 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 MOGAT3Q86VF5 341 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 OR8H2Q8N162 312 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 GDPD1Q8N9F7 314 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 OR10K1Q8NGX5 313 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 FCAMRQ8WWV6 532 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 BORCS5Q969J3 196 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 RAB3CQ96E17 227 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 NKX3-1Q99801 234 aaPredicted RBP9.9□□□□□ -0.82
LDLR-212ENST00000560467 NUDT16L1Q9BRJ7 211 aaKnown RBP9.9□□□□□ -0.82
LDLR-212ENST00000560467 TLNRD1Q9H1K6 362 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 BANF2Q9H503 90 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 RNF7Q9UBF6 113 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 DNAJB11Q9UBS4 358 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 NPTNQ9Y639 398 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 MEGF8Q7Z7M0 2845 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 TRAV18A0A075B6X5 111 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 IGHV3-64DA0A0J9YX35 117 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 FAM90A10PA6NDY2 464 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 FAM90A18PA6NE21 464 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 FAM90A16PA6NEW6 464 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 FAM90A20PA6NIJ5 464 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 FAM90A8PA6NJQ4 464 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 FAM90A7PA6NKC0 464 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 FAM90A22PA8MWA6 464 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 FAM90A12PA8MX19 464 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 FAM90A5PA8MXJ8 464 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 FAM90A23PA8MXZ1 464 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 LYNX1G3V0Z9 82 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 DEGS1O15121 323 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 SYNGR1O43759 233 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 NOS1APO75052 506 aaPredicted RBP9.89□□□□□ -0.83
LDLR-212ENST00000560467 FAM90A15PP0C7V4 464 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 FAM90A13PP0C7W8 464 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 FAM90A14PP0C7W9 464 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 FAM90A24PP0C7X0 464 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 LYNX1P0DP58 116 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 PRKACAP17612 351 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 BCL3P20749 454 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 GLRA1P23415 457 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 GABRR1P24046 479 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 BLVRBP30043 206 aaPredicted RBP9.89□□□□□ -0.83
LDLR-212ENST00000560467 PRSS3P35030 304 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 VEGFCP49767 419 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 PPP5CP53041 499 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 FGF12P61328 243 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 MAB21L1Q13394 359 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 RBM39Q14498 530 aaKnown RBP9.89□□□□□ -0.83
LDLR-212ENST00000560467 KCNJ8Q15842 424 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 MSMPQ1L6U9 139 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 MPV17LQ2QL34 196 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 HFEQ30201 348 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 SPIN3Q5JUX0 258 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 PRAMEF6Q5VXH4 476 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 TRIQKQ629K1 86 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 Q6ZTK2 550 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 C1QL2Q7Z5L3 287 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 FAM90A1Q86YD7 464 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 POC1AQ8NBT0 407 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 C19orf18Q8NEA5 215 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 OR4M1Q8NGD0 313 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 OR10R2Q8NGX6 335 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 LRRC29Q8WV35 223 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 ITLN1Q8WWA0 313 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 NEU4Q8WWR8 484 aaPredicted RBP9.89□□□□□ -0.83
LDLR-212ENST00000560467 MIXL1Q9H2W2 232 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 OCEL1Q9H607 264 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 PLEKHJ1Q9NW61 149 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 MTCH1Q9NZJ7 389 aa9.89□□□□□ -0.83
LDLR-212ENST00000560467 LDLRAD4O15165 306 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 OR7C1O76099 320 aaPredicted RBP9.88□□□□□ -0.83
LDLR-212ENST00000560467 PTBP3O95758 552 aaKnown RBP9.88□□□□□ -0.83
LDLR-212ENST00000560467 GSTT2BP0CG30 244 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 PGA5P0DJD9 388 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 FUT3P21217 361 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 CDK2P24941 298 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 CFHR2P36980 270 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 GNG2P59768 71 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 QRFPP83859 136 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 SCN1BQ07699 218 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 IKZF1Q13422 519 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 DCTN2Q13561 401 aaKnown RBP9.88□□□□□ -0.83
LDLR-212ENST00000560467 ARFRP1Q13795 201 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 NKAPLQ5M9Q1 402 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 ATAD3CQ5T2N8 411 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 SNX29P2Q8IUI4 249 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 Q8N402 240 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 BOLLQ8N9W6 283 aaKnown RBP9.88□□□□□ -0.83
LDLR-212ENST00000560467 TMEM104Q8NE00 496 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 PPP1R35Q8TAP8 253 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 Q8TCH9 128 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 CCL17Q92583 94 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 SLC25A38Q96DW6 304 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 NRIP2Q9BQI9 281 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 CCDC32Q9BV29 185 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 TM2D1Q9BX74 207 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 LPAR5Q9H1C0 372 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 AKIP1Q9NQ31 210 aa9.88□□□□□ -0.83
LDLR-212ENST00000560467 HEATR1Q9H583 2144 aaKnown RBP9.88□□□□□ -0.83
LDLR-212ENST00000560467 SERPINE3A8MV23 424 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms