RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 FBXW9Q5XUX1 488 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 OR52L2PQ8NGH6 319 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 BCL2L2Q92843 193 aaPredicted RBP11.9□□□□□ -0.5
TRAF3-208ENST00000560371 ZNF236Q9UL36 1845 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 TMEM272A0A1B0GTI8 110 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 PNPP00491 289 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 LIMS3P0CW19 117 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 LIMS4P0CW20 117 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 HMGA2P52926 109 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 CD300LDQ6UXZ3 194 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 SSX8Q7RTT4 187 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 NECAP1Q8NC96 275 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 ZNF764Q96H86 408 aaPredicted RBP11.9□□□□□ -0.5
TRAF3-208ENST00000560371 SLC25A32Q9H2D1 315 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 CST2P09228 141 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 OR3A1P47881 315 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 OR2B8PP59922 312 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 ATG4DQ86TL0 474 aaPredicted RBP11.9□□□□□ -0.5
TRAF3-208ENST00000560371 SLC22A18ASQ8N1D0 253 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 CNTD2Q9H8S5 307 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 MED13LQ71F56 2210 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 OR4A8P0C604 315 aa11.9□□□□□ -0.51
TRAF3-208ENST00000560371 KRTCAP3Q53RY4 240 aa11.9□□□□□ -0.51
TRAF3-208ENST00000560371 PYCARD-AS1I3L0S3 204 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 DUS4LO95620 317 aaKnown RBP11.89□□□□□ -0.51
TRAF3-208ENST00000560371 AMTP48728 403 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 INO80CQ6PI98 192 aaPredicted RBP11.89□□□□□ -0.51
TRAF3-208ENST00000560371 OR52B4Q8NGK2 314 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 GRAMD2BQ96HH9 432 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 SMIM7Q9BQ49 75 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 RYDENQ9NUL5 291 aaKnown RBP11.89□□□□□ -0.51
TRAF3-208ENST00000560371 HIKESHIQ53FT3 197 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 ZNF501Q96CX3 271 aaPredicted RBP11.89□□□□□ -0.51
TRAF3-208ENST00000560371 SMIM12Q96EX1 92 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 WDR89Q96FK6 387 aaPredicted RBP11.89□□□□□ -0.51
TRAF3-208ENST00000560371 RALGAPA2Q2PPJ7 1873 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 ZFP36L2P47974 494 aaKnown RBP11.89□□□□□ -0.51
TRAF3-208ENST00000560371 MOGAT3Q86VF5 341 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 RBPMSQ93062 196 aaKnown RBP11.89□□□□□ -0.51
TRAF3-208ENST00000560371 PILRBQ9UKJ0 227 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 INSIG2Q9Y5U4 225 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 KPTNQ9Y664 436 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 CDIPTO14735 213 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 ASB13Q8WXK3 278 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 CLN8Q9UBY8 286 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 LANCL1O43813 399 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 WNT1P04628 370 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 FPR2P25090 351 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 DEFA6Q01524 100 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 TMEM267Q0VDI3 215 aaPredicted RBP11.89□□□□□ -0.51
TRAF3-208ENST00000560371 ADAM5Q6NVV9 412 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 OR2M3Q8NG83 312 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 HSD17B10Q99714 261 aaKnown RBP11.89□□□□□ -0.51
TRAF3-208ENST00000560371 RCL1Q9Y2P8 373 aaKnown RBP11.89□□□□□ -0.51
TRAF3-208ENST00000560371 AKR1C3P42330 323 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 CLDN20P56880 219 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 ZNF239Q16600 458 aaKnown RBP11.89□□□□□ -0.51
TRAF3-208ENST00000560371 LINC00303Q3SY05 128 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 CLEC2AQ6UVW9 174 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 ZDHHC22Q8N966 263 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 C10orf90Q96M02 699 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 RASL11BQ9BPW5 248 aa11.89□□□□□ -0.51
TRAF3-208ENST00000560371 LY86O95711 162 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 SP9P0CG40 484 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 TRAPPC2P0DI81 140 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 TRAPPC2BP0DI82 140 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 ZNF17P17021 662 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 FGF9P31371 208 aaPredicted RBP11.88□□□□□ -0.51
TRAF3-208ENST00000560371 RHOBP62745 196 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 OR4F17Q8NGA8 305 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 NAGKQ9UJ70 344 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 DNPH1O43598 174 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 ACSM4P0C7M7 580 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 CNN1P51911 297 aaKnown RBP11.88□□□□□ -0.51
TRAF3-208ENST00000560371 MESP2Q0VG99 397 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 C9orf40Q8IXQ3 194 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 ADTRPQ96IZ2 230 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 ZNF385DQ9H6B1 395 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 COX6B1P14854 86 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 SFTPA2Q8IWL1 248 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 C14orf79Q96F83 325 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 TGIF2Q9GZN2 237 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 LPAR2Q9HBW0 351 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 TINAGQ9UJW2 476 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 SPP1P10451 314 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 CD96P40200 585 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 LPAR6P43657 344 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 ASCL1P50553 236 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 LRRTM1Q86UE6 522 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 OR10Z1Q8NGY1 313 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 EXOGQ9Y2C4 368 aaKnown RBP11.88□□□□□ -0.51
TRAF3-208ENST00000560371 HOXD4P09016 255 aaPredicted RBP11.88□□□□□ -0.51
TRAF3-208ENST00000560371 ZNF260Q3ZCT1 412 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 BAP18Q8IXM2 172 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 OR4S2Q8NH73 311 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 VSTM2AQ8TAG5 236 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 VPS25Q9BRG1 176 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 TMUB1Q9BVT8 246 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 TOX4O94842 621 aa11.88□□□□□ -0.51
TRAF3-208ENST00000560371 CD37P11049 281 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms