RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 ACSM1Q08AH1 577 aa9.48□□□□□ -0.89
RABGGTA-216ENST00000560243 DMKNQ6E0U4 476 aaPredicted RBP9.48□□□□□ -0.89
RABGGTA-216ENST00000560243 AHSA2Q719I0 299 aa9.48□□□□□ -0.89
RABGGTA-216ENST00000560243 SATL1Q86VE3 508 aa9.48□□□□□ -0.89
RABGGTA-216ENST00000560243 SAXO1Q8IYX7 474 aa9.48□□□□□ -0.89
RABGGTA-216ENST00000560243 BPIFB6Q8NFQ5 453 aa9.48□□□□□ -0.89
RABGGTA-216ENST00000560243 OR52N1Q8NH53 320 aa9.48□□□□□ -0.89
RABGGTA-216ENST00000560243 HAVCR2Q8TDQ0 301 aa9.48□□□□□ -0.89
RABGGTA-216ENST00000560243 GHSRQ92847 366 aa9.48□□□□□ -0.89
RABGGTA-216ENST00000560243 TMEM106AQ96A25 262 aa9.48□□□□□ -0.89
RABGGTA-216ENST00000560243 SMIM19Q96E16 107 aa9.48□□□□□ -0.89
RABGGTA-216ENST00000560243 ZNF747Q9BV97 191 aa9.48□□□□□ -0.89
RABGGTA-216ENST00000560243 SF3B6Q9Y3B4 125 aaKnown RBP9.48□□□□□ -0.89
RABGGTA-216ENST00000560243 VWFP04275 2813 aa9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 PNMA8CA0A1B0GUJ8 204 aa9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 A0A1W2PPH5 198 aa9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 EFCAB10A6NFE3 127 aa9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 PAHP00439 452 aa9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 AQP4P55087 323 aa9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 RAG2P55895 527 aa9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 RPS11P62280 158 aaKnown RBP eCLIP9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 GABPB1Q06547 395 aaPredicted RBP9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 SRSF4Q08170 494 aaKnown RBP9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 MIDNQ504T8 468 aa9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 SPIN3Q5JUX0 258 aa9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 LDLRAD2Q5SZI1 272 aa9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 Q6P435 159 aa9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 LHFPL4Q7Z7J7 247 aa9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 ZSCAN4Q8NAM6 433 aaPredicted RBP9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 OR10K1Q8NGX5 313 aa9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 SGCDQ92629 289 aa9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 DYRK2Q92630 601 aa9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 PGLYRP3Q96LB9 341 aa9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 PPA2Q9H2U2 334 aa9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 DPAGT1Q9H3H5 408 aa9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 HEXA-AS1Q9H8Q6 139 aa9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 EXOSC4Q9NPD3 245 aaKnown RBP9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 PLCXD1Q9NUJ7 323 aa9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 FKBP14Q9NWM8 211 aa9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 CHCHD3Q9NX63 227 aaKnown RBP9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 CNOT2Q9NZN8 540 aaKnown RBP9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 ZNF281Q9Y2X9 895 aa9.47□□□□□ -0.89
RABGGTA-216ENST00000560243 TRAV8-7A0A075B6U6 113 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 A0A0G2JK05 382 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 TRBV5-5A0A0J9YX44 114 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 MAGEA13PA6NCF6 341 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 SH2D1BO14796 132 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 MGST3O14880 152 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 MMP23AO75900 390 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 CDRT1O95170 752 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 CRYBA1P05813 215 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 IGHV1-8P0DP01 117 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 OR3A4PP47883 348 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 GLIPR1P48060 266 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 P2RX3P56373 397 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 MEF2CQ06413 473 aaPredicted RBP9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 AESQ08117 197 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 BAIAP2L2Q6UXY1 529 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 DYNAPQ8N1N2 210 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 BEND2Q8NDZ0 799 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 TNFAIP8L1Q8WVP5 186 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 ZNF714Q96N38 554 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 NR1H4Q96RI1 486 aaPredicted RBP9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 GPER1Q99527 375 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 VCXQ9H320 206 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 ING3Q9NXR8 418 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 ZNF581Q9P0T4 197 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 VPREB3Q9UKI3 123 aa9.46□□□□□ -0.9
RABGGTA-216ENST00000560243 hCG_1809904A0A1W2PP81 198 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 A0A1W2PPE2 198 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 A0A1W2PPK0 400 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 A0A1W2PR64 198 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 A0A1W2PRV1 198 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 hADV38S2A0JD32 116 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 H3BUX3 64 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 SLC33A1O00400 549 aaPredicted RBP9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 NDUFA7O95182 113 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 CD2P06729 351 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 ZNF44P15621 663 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 IGFBP3P17936 291 aaPredicted RBP9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 LMO1P25800 156 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 MED21Q13503 144 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 ASCL4Q6XD76 172 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 STX19Q8N4C7 294 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 PXT1Q8NFP0 134 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 OR4F5Q8NH21 305 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 COQ2Q96H96 371 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 OR14A2Q96R54 314 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 SSX3Q99909 188 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 FAM192AQ9GZU8 254 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 PAK1IP1Q9NWT1 392 aaPredicted RBP9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 GLS2Q9UI32 602 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 MMP24Q9Y5R2 645 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 LINC00312Q9Y6C7 94 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 WNK1Q9H4A3 2382 aa9.45□□□□□ -0.9
RABGGTA-216ENST00000560243 TRBV5-7A0A0A0MS05 114 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 TRAV24A0A0B4J272 114 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 MEGF11A6BM72 1044 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 FAM90A8PA6NJQ4 464 aa9.44□□□□□ -0.9
RABGGTA-216ENST00000560243 POM121CA8CG34 1229 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms