RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 DUX4L9Q6RFH8 374 aaPredicted RBP12.32□□□□□ -0.44
SNRPA1-207ENST00000559309 C17orf107Q6ZR85 190 aa12.32□□□□□ -0.44
SNRPA1-207ENST00000559309 DEFB108BQ8NET1 73 aa12.32□□□□□ -0.44
SNRPA1-207ENST00000559309 REG4Q9BYZ8 158 aa12.32□□□□□ -0.44
SNRPA1-207ENST00000559309 SLIRPQ9GZT3 109 aaKnown RBP12.32□□□□□ -0.44
SNRPA1-207ENST00000559309 BATF3Q9NR55 127 aa12.32□□□□□ -0.44
SNRPA1-207ENST00000559309 CCDC59Q9P031 241 aaKnown RBP12.32□□□□□ -0.44
SNRPA1-207ENST00000559309 DUX4Q9UBX2 424 aa12.32□□□□□ -0.44
SNRPA1-207ENST00000559309 MIOXQ9UGB7 285 aa12.32□□□□□ -0.44
SNRPA1-207ENST00000559309 SPATA2Q9UM82 520 aa12.32□□□□□ -0.44
SNRPA1-207ENST00000559309 ST3GAL6Q9Y274 331 aa12.32□□□□□ -0.44
SNRPA1-207ENST00000559309 ETV7Q9Y603 341 aa12.32□□□□□ -0.44
SNRPA1-207ENST00000559309 DNHD1Q96M86 4753 aa12.32□□□□□ -0.44
SNRPA1-207ENST00000559309 TRAV24A0A0B4J272 114 aa12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 TMEM82A0PJX8 343 aa12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 GEMIN2O14893 280 aaKnown RBP12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 HTR3BO95264 441 aa12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 GYPAP02724 150 aa12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 SERPINA2P20848 420 aa12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 USF1P22415 310 aaPredicted RBP12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 IL2RGP31785 369 aa12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 RORCP51449 518 aa12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 PAX2Q02962 417 aa12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 CARTPTQ16568 116 aa12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 C11orf91Q3C1V1 193 aa12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 ZNF561Q8N587 486 aa12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 BOLLQ8N9W6 283 aaKnown RBP12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 OR5T2Q8NGG2 359 aa12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 SLC25A38Q96DW6 304 aa12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 S100A13Q99584 98 aa12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 CCL13Q99616 98 aa12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 FAM234AQ9H0X4 552 aa12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 ZNF665Q9H7R5 613 aa12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 ZNF581Q9P0T4 197 aa12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 DNAJB11Q9UBS4 358 aa12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 ZANQ9Y493 2812 aa12.31□□□□□ -0.44
SNRPA1-207ENST00000559309 FLNAP21333 2647 aaKnown RBP12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 DSCAML1Q8TD84 2053 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 KIAA1324LA8MWY0 1029 aaPredicted RBP12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 K7N7A8 449 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 SLC33A1O00400 549 aaPredicted RBP12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 PSPNO60542 156 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 OR2H2O95918 312 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 HAND1O96004 215 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 PAHP00439 452 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 CSTBP04080 98 aaKnown RBP12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 TFF1P04155 84 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 CSN2P05814 226 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 GLAP06280 429 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 CHRM2P08172 466 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 ZNF182P17025 639 aaPredicted RBP12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 CEBPDP49716 269 aaPredicted RBP12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 TMEM50BP56557 158 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 IL13RA1P78552 427 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 GAPTQ8N292 157 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 CHST4Q8NCG5 386 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 OR5H6Q8NGV6 325 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 LGALS14Q8TCE9 139 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 ACOT12Q8WYK0 555 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 NEIL1Q96FI4 390 aaPredicted RBP12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 MED30Q96HR3 178 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 COX4I2Q96KJ9 171 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 CMTM3Q96MX0 182 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 TMEM59Q9BXS4 323 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 ABCG5Q9H222 651 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 BANF2Q9H503 90 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 RAB22AQ9UL26 194 aa12.3□□□□□ -0.44
SNRPA1-207ENST00000559309 A0A075B6Q4 140 aa12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 RNF223E7ERA6 249 aa12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 RAB27BO00194 218 aa12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 CRTAPO75718 401 aaPredicted RBP12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 MPIG6BO95866 241 aa12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 SELLP14151 372 aa12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 SNRPBP14678 240 aaKnown RBP12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 CHATP28329 748 aa12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 NPY4RP50391 375 aa12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 GMFBP60983 142 aa12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 SEC61A1P61619 476 aaKnown RBP12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 COL10A1Q03692 680 aa12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 TAF9Q16594 264 aa12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 IDNKQ5T6J7 187 aa12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 FIP1L1Q6UN15 594 aaKnown RBP12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 SLC36A1Q7Z2H8 476 aa12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 CIARTQ8N365 385 aaPredicted RBP12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 FAM216BQ8N7L0 139 aa12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 SNX22Q96L94 193 aa12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 GAL3ST1Q99999 423 aa12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 NUDT16L1Q9BRJ7 211 aaKnown RBP12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 NICN1Q9BSH3 213 aa12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 TMUB1Q9BVT8 246 aa12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 SELENOIQ9C0D9 397 aa12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 ELL3Q9HB65 397 aaPredicted RBP12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 ANK3Q12955 4377 aaKnown RBP12.29□□□□□ -0.44
SNRPA1-207ENST00000559309 MALRD1Q5VYJ5 2156 aa12.28□□□□□ -0.44
SNRPA1-207ENST00000559309 FAM157AC9JC47 383 aa12.28□□□□□ -0.44
SNRPA1-207ENST00000559309 SH2D1BO14796 132 aa12.28□□□□□ -0.44
SNRPA1-207ENST00000559309 GPR37O15354 613 aa12.28□□□□□ -0.44
SNRPA1-207ENST00000559309 TMPRSS2O15393 492 aa12.28□□□□□ -0.44
SNRPA1-207ENST00000559309 ADAM20O43506 726 aa12.28□□□□□ -0.44
SNRPA1-207ENST00000559309 TK1P04183 234 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms