RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 MPV17LQ2QL34 196 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 ESCO2Q56NI9 601 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 PAN3Q58A45 887 aaKnown RBP5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 LRRC10Q5BKY1 277 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 NKAPLQ5M9Q1 402 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 ATAD3CQ5T2N8 411 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 ATPAF1Q5TC12 328 aaPredicted RBP5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 ZNF788Q6ZQV5 615 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 KRTAP1-3Q8IUG1 177 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 ZNF561Q8N587 486 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 FAM216BQ8N7L0 139 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 SAMD12Q8N8I0 201 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 CHST4Q8NCG5 386 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 WFDC11Q8NEX6 87 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 Q8NFD4 153 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 OR56B1Q8NGI3 324 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 CLDND2Q8NHS1 167 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 PPP1R35Q8TAP8 253 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 DYNC2LI1Q8TCX1 351 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 NEK7Q8TDX7 302 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 PTX4Q96A99 478 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 PHF21AQ96BD5 680 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 NEIL1Q96FI4 390 aaPredicted RBP5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 SDSLQ96GA7 329 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 Q96M66 194 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 GAFA1Q96PS6 74 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 NEDD4LQ96PU5 975 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 BARHL1Q9BZE3 327 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 C6orf62Q9GZU0 229 aaPredicted RBP5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 PATZ1Q9HBE1 687 aaKnown RBP5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 SPACA1Q9HBV2 294 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 RHBDL2Q9NX52 303 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 COMMD3Q9UBI1 195 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 KAAG1Q9UBP8 84 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 FBLN5Q9UBX5 448 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 ZNF222Q9UK12 451 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 SPATA2Q9UM82 520 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 TANC2Q9HCD6 1990 aa5.51□□□□□ -1.53
CHRNA3-204ENST00000559002 HSPB6O14558 160 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 DVL1O14640 695 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 LDLRAD4O15165 306 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 RGS5O15539 181 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 PDCD6O75340 191 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 IGHV2-5P01817 119 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 TFF1P04155 84 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 NDUFB7P17568 137 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 BLVRBP30043 206 aaPredicted RBP5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 VEGFCP49767 419 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 NPY4RP50391 375 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 EFNB2P52799 333 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 GNB2P62879 340 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 LOXL1Q08397 574 aaPredicted RBP5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 PLA2G7Q13093 441 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 PDCD1Q15116 288 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 GRK1Q15835 563 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 UBE2NLQ5JXB2 153 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 RAB12Q6IQ22 244 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 Q6P435 159 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 LYPD2Q6UXB3 125 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 GDPD3Q7L5L3 318 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 CD177Q8N6Q3 437 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 ZNRF1Q8ND25 227 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 OR5H6Q8NGV6 325 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 MCFD2Q8NI22 146 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 ST8SIA4Q92187 359 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 POM121Q96HA1 1249 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 SNX22Q96L94 193 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 NICN1Q9BSH3 213 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 TM2D1Q9BX74 207 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 REG4Q9BYZ8 158 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 LPAR5Q9H1C0 372 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 ATG5Q9H1Y0 275 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 SEBOXQ9HB31 216 aaPredicted RBP5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 SLC25A10Q9UBX3 287 aaPredicted RBP5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 CLN8Q9UBY8 286 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 METRNQ9UJH8 293 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 ADAM30Q9UKF2 790 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 ZANQ9Y493 2812 aa5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 CHD3Q12873 2000 aaKnown RBP5.5□□□□□ -1.53
CHRNA3-204ENST00000559002 A0A075B6Q4 140 aa5.49□□□□□ -1.53
CHRNA3-204ENST00000559002 A0A0A6YYD4 124 aa5.49□□□□□ -1.53
CHRNA3-204ENST00000559002 A0A1B0GW55 424 aa5.49□□□□□ -1.53
CHRNA3-204ENST00000559002 TMEM82A0PJX8 343 aa5.49□□□□□ -1.53
CHRNA3-204ENST00000559002 FUOMA2VDF0 154 aa5.49□□□□□ -1.53
CHRNA3-204ENST00000559002 FAM25AB3EWG3 89 aa5.49□□□□□ -1.53
CHRNA3-204ENST00000559002 FAM25CB3EWG5 89 aa5.49□□□□□ -1.53
CHRNA3-204ENST00000559002 FAM25GB3EWG6 89 aa5.49□□□□□ -1.53
CHRNA3-204ENST00000559002 MCRIP1C9JLW8 97 aa5.49□□□□□ -1.53
CHRNA3-204ENST00000559002 F5H0A9 414 aaPredicted RBP5.49□□□□□ -1.53
CHRNA3-204ENST00000559002 H7C1Q1 480 aa5.49□□□□□ -1.53
CHRNA3-204ENST00000559002 SLC33A1O00400 549 aaPredicted RBP5.49□□□□□ -1.53
CHRNA3-204ENST00000559002 TNFRSF13BO14836 293 aaPredicted RBP5.49□□□□□ -1.53
CHRNA3-204ENST00000559002 MGST3O14880 152 aa5.49□□□□□ -1.53
CHRNA3-204ENST00000559002 SMAD7O15105 426 aaKnown RBP5.49□□□□□ -1.53
CHRNA3-204ENST00000559002 GPR37O15354 613 aa5.49□□□□□ -1.53
CHRNA3-204ENST00000559002 ZNF737O75373 536 aa5.49□□□□□ -1.53
CHRNA3-204ENST00000559002 TK1P04183 234 aa5.49□□□□□ -1.53
CHRNA3-204ENST00000559002 WNT2P09544 360 aa5.49□□□□□ -1.53
CHRNA3-204ENST00000559002 DUX4L2P0CJ85 424 aa5.49□□□□□ -1.53
CHRNA3-204ENST00000559002 DUX4L3P0CJ86 424 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms