RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 OR5V1Q9UGF6 321 aa12.8□□□□□ -0.36
LINC01220-201ENST00000558575 GSTK1Q9Y2Q3 226 aa12.8□□□□□ -0.36
LINC01220-201ENST00000558575 AK6Q9Y3D8 172 aaKnown RBP12.8□□□□□ -0.36
LINC01220-201ENST00000558575 NKX6-3A6NJ46 265 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 K7N7A8 449 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 ARL6IP5O75915 188 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 HTR3BO95264 441 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 HAND1O96004 215 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 CHRM2P08172 466 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 GALP22466 123 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 CALRP27797 417 aaKnown RBP12.79□□□□□ -0.36
LINC01220-201ENST00000558575 MTNR1BP49286 362 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 CAV3P56539 151 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 PDCD1Q15116 288 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 LRRC10Q5BKY1 277 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 DCAF12L2Q5VW00 463 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 GLIPR1L1Q6UWM5 242 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 C17orf107Q6ZR85 190 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 ZNF561Q8N587 486 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 NKAIN3Q8N8D7 197 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 LY6G5BQ8NDX9 201 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 OR51T1Q8NGJ9 327 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 GCDHQ92947 438 aaPredicted RBP12.79□□□□□ -0.36
LINC01220-201ENST00000558575 SLC25A28Q96A46 364 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 NUDT16L1Q9BRJ7 211 aaKnown RBP12.79□□□□□ -0.36
LINC01220-201ENST00000558575 UQCC2Q9BRT2 126 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 DCTN5Q9BTE1 182 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 OCEL1Q9H607 264 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 ZNF581Q9P0T4 197 aa12.79□□□□□ -0.36
LINC01220-201ENST00000558575 RPUSD1Q9UJJ7 312 aaKnown RBP12.79□□□□□ -0.36
LINC01220-201ENST00000558575 MRPS28Q9Y2Q9 187 aaKnown RBP12.79□□□□□ -0.36
LINC01220-201ENST00000558575 A0A0A6YYJ9 748 aa12.78□□□□□ -0.36
LINC01220-201ENST00000558575 A0A0G2JMP0 313 aa12.78□□□□□ -0.36
LINC01220-201ENST00000558575 A0A0X1KG70 313 aa12.78□□□□□ -0.36
LINC01220-201ENST00000558575 PSPNO60542 156 aa12.78□□□□□ -0.36
LINC01220-201ENST00000558575 ECDO95905 644 aaPredicted RBP12.78□□□□□ -0.36
LINC01220-201ENST00000558575 TK1P04183 234 aa12.78□□□□□ -0.36
LINC01220-201ENST00000558575 CD36P16671 472 aa12.78□□□□□ -0.36
LINC01220-201ENST00000558575 GADD45AP24522 165 aa12.78□□□□□ -0.36
LINC01220-201ENST00000558575 LMO1P25800 156 aa12.78□□□□□ -0.36
LINC01220-201ENST00000558575 FGF9P31371 208 aaPredicted RBP12.78□□□□□ -0.36
LINC01220-201ENST00000558575 RSU1Q15404 277 aa12.78□□□□□ -0.36
LINC01220-201ENST00000558575 C11orf91Q3C1V1 193 aa12.78□□□□□ -0.36
LINC01220-201ENST00000558575 MIDNQ504T8 468 aa12.78□□□□□ -0.36
LINC01220-201ENST00000558575 SPIN3Q5JUX0 258 aa12.78□□□□□ -0.36
LINC01220-201ENST00000558575 CD276Q5ZPR3 534 aa12.78□□□□□ -0.36
LINC01220-201ENST00000558575 C22orf42Q6IC83 251 aa12.78□□□□□ -0.36
LINC01220-201ENST00000558575 METAP1DQ6UB28 335 aaPredicted RBP12.78□□□□□ -0.36
LINC01220-201ENST00000558575 PNLDC1Q8NA58 520 aaKnown RBP12.78□□□□□ -0.36
LINC01220-201ENST00000558575 TMEM185AQ8NFB2 350 aa12.78□□□□□ -0.36
LINC01220-201ENST00000558575 OR4M2Q8NGB6 313 aa12.78□□□□□ -0.36
LINC01220-201ENST00000558575 YIPF6Q96EC8 236 aa12.78□□□□□ -0.36
LINC01220-201ENST00000558575 METTL9Q9H1A3 318 aa12.78□□□□□ -0.36
LINC01220-201ENST00000558575 C7orf69Q9H7B7 122 aa12.78□□□□□ -0.36
LINC01220-201ENST00000558575 TXNL4BQ9NX01 149 aaKnown RBP12.78□□□□□ -0.36
LINC01220-201ENST00000558575 STUB1Q9UNE7 303 aa12.78□□□□□ -0.36
LINC01220-201ENST00000558575 TRAV1-2A0A0B4J238 106 aa12.77□□□□□ -0.37
LINC01220-201ENST00000558575 J3QLI3 93 aa12.77□□□□□ -0.37
LINC01220-201ENST00000558575 GPR37O15354 613 aa12.77□□□□□ -0.37
LINC01220-201ENST00000558575 OR2H2O95918 312 aa12.77□□□□□ -0.37
LINC01220-201ENST00000558575 NDUFB7P17568 137 aa12.77□□□□□ -0.37
LINC01220-201ENST00000558575 GATA3P23771 443 aa12.77□□□□□ -0.37
LINC01220-201ENST00000558575 PIGYQ3MUY2 71 aa12.77□□□□□ -0.37
LINC01220-201ENST00000558575 SLC22A6Q4U2R8 563 aa12.77□□□□□ -0.37
LINC01220-201ENST00000558575 GLT8D1Q68CQ7 371 aa12.77□□□□□ -0.37
LINC01220-201ENST00000558575 NR2C2APQ86WQ0 139 aa12.77□□□□□ -0.37
LINC01220-201ENST00000558575 TMEM104Q8NE00 496 aa12.77□□□□□ -0.37
LINC01220-201ENST00000558575 OR4S1Q8NGB4 309 aa12.77□□□□□ -0.37
LINC01220-201ENST00000558575 C8orf46Q8TAG6 207 aa12.77□□□□□ -0.37
LINC01220-201ENST00000558575 TBC1D15Q8TC07 691 aa12.77□□□□□ -0.37
LINC01220-201ENST00000558575 FOXRED1Q96CU9 486 aaPredicted RBP12.77□□□□□ -0.37
LINC01220-201ENST00000558575 SNX22Q96L94 193 aa12.77□□□□□ -0.37
LINC01220-201ENST00000558575 FAM234AQ9H0X4 552 aa12.77□□□□□ -0.37
LINC01220-201ENST00000558575 SLITRK2Q9H156 845 aa12.77□□□□□ -0.37
LINC01220-201ENST00000558575 RNF167Q9H6Y7 350 aa12.77□□□□□ -0.37
LINC01220-201ENST00000558575 WNK1Q9H4A3 2382 aa12.76□□□□□ -0.37
LINC01220-201ENST00000558575 SIRPB1O00241 398 aa12.76□□□□□ -0.37
LINC01220-201ENST00000558575 SH2D1BO14796 132 aa12.76□□□□□ -0.37
LINC01220-201ENST00000558575 SLC22A1O15245 554 aa12.76□□□□□ -0.37
LINC01220-201ENST00000558575 SERPINA2P20848 420 aa12.76□□□□□ -0.37
LINC01220-201ENST00000558575 OR3A1P47881 315 aa12.76□□□□□ -0.37
LINC01220-201ENST00000558575 BMXP51813 675 aa12.76□□□□□ -0.37
LINC01220-201ENST00000558575 OR10A3P58181 314 aa12.76□□□□□ -0.37
LINC01220-201ENST00000558575 QRFPP83859 136 aa12.76□□□□□ -0.37
LINC01220-201ENST00000558575 SCN1BQ07699 218 aa12.76□□□□□ -0.37
LINC01220-201ENST00000558575 NHLRC3Q5JS37 347 aa12.76□□□□□ -0.37
LINC01220-201ENST00000558575 AWAT2Q6E213 333 aa12.76□□□□□ -0.37
LINC01220-201ENST00000558575 OR10K2Q6IF99 312 aa12.76□□□□□ -0.37
LINC01220-201ENST00000558575 OSR2Q8N2R0 312 aa12.76□□□□□ -0.37
LINC01220-201ENST00000558575 CYYR1Q96J86 154 aa12.76□□□□□ -0.37
LINC01220-201ENST00000558575 CHCHD6Q9BRQ6 235 aa12.76□□□□□ -0.37
LINC01220-201ENST00000558575 EXOSC4Q9NPD3 245 aaKnown RBP12.76□□□□□ -0.37
LINC01220-201ENST00000558575 C19orf12Q9NSK7 152 aa12.76□□□□□ -0.37
LINC01220-201ENST00000558575 CMYA5Q8N3K9 4069 aa12.76□□□□□ -0.37
LINC01220-201ENST00000558575 TRAV24A0A0B4J272 114 aa12.75□□□□□ -0.37
LINC01220-201ENST00000558575 SLC33A1O00400 549 aaPredicted RBP12.75□□□□□ -0.37
LINC01220-201ENST00000558575 GEMIN2O14893 280 aaKnown RBP12.75□□□□□ -0.37
LINC01220-201ENST00000558575 DEGS1O15121 323 aa12.75□□□□□ -0.37
LINC01220-201ENST00000558575 ENSAO43768 121 aaKnown RBP12.75□□□□□ -0.37
LINC01220-201ENST00000558575 ZNF780AO75290 641 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms