RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 ZNF737O75373 536 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 RGS9O75916 674 aaPredicted RBP10.27□□□□□ -0.77
SLIRP-211ENST00000557623 IGHV1-69P01742 117 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 IGFBP3P17936 291 aaPredicted RBP10.27□□□□□ -0.77
SLIRP-211ENST00000557623 ZNF93P35789 620 aaPredicted RBP10.27□□□□□ -0.77
SLIRP-211ENST00000557623 GPR50Q13585 617 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 KRTAP24-1Q3LI83 254 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 NCR3LG1Q68D85 454 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 ELP2Q6IA86 826 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 ASPHD2Q6ICH7 369 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 BRD3OSQ6XYD6 125 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 RNF144BQ7Z419 303 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 BCL6BQ8N143 479 aaPredicted RBP10.27□□□□□ -0.77
SLIRP-211ENST00000557623 OR8H2Q8N162 312 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 SIGLECL1Q8N7X8 197 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 TNFAIP8L1Q8WVP5 186 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 OR14A2Q96R54 314 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 OR5M11Q96RB7 305 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 S100A13Q99584 98 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 CCDC90BQ9GZT6 254 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 FAM192AQ9GZU8 254 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 METTL8Q9H825 291 aaKnown RBP10.27□□□□□ -0.77
SLIRP-211ENST00000557623 ZMAT3Q9HA38 289 aaKnown RBP10.27□□□□□ -0.77
SLIRP-211ENST00000557623 ISYNA1Q9NPH2 558 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 PCDHB16Q9NRJ7 776 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 C19orf12Q9NSK7 152 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 GSTK1Q9Y2Q3 226 aa10.27□□□□□ -0.77
SLIRP-211ENST00000557623 LSM2Q9Y333 95 aaKnown RBP10.27□□□□□ -0.77
SLIRP-211ENST00000557623 CALCBP10092 127 aa10.26□□□□□ -0.77
SLIRP-211ENST00000557623 GABRR1P24046 479 aa10.26□□□□□ -0.77
SLIRP-211ENST00000557623 PRTN3P24158 256 aa10.26□□□□□ -0.77
SLIRP-211ENST00000557623 EEF1B2P24534 225 aaKnown RBP10.26□□□□□ -0.77
SLIRP-211ENST00000557623 TGFBR2P37173 567 aa10.26□□□□□ -0.77
SLIRP-211ENST00000557623 PTGFRP43088 359 aa10.26□□□□□ -0.77
SLIRP-211ENST00000557623 SNU13P55769 128 aaKnown RBP10.26□□□□□ -0.77
SLIRP-211ENST00000557623 EDDM3BP56851 147 aa10.26□□□□□ -0.77
SLIRP-211ENST00000557623 SRSF2Q01130 221 aaKnown RBP10.26□□□□□ -0.77
SLIRP-211ENST00000557623 MEF2CQ06413 473 aaPredicted RBP10.26□□□□□ -0.77
SLIRP-211ENST00000557623 DOC2BQ14184 412 aa10.26□□□□□ -0.77
SLIRP-211ENST00000557623 RSU1Q15404 277 aa10.26□□□□□ -0.77
SLIRP-211ENST00000557623 GRK1Q15835 563 aa10.26□□□□□ -0.77
SLIRP-211ENST00000557623 TMEM200BQ69YZ2 307 aa10.26□□□□□ -0.77
SLIRP-211ENST00000557623 CDH26Q8IXH8 852 aa10.26□□□□□ -0.77
SLIRP-211ENST00000557623 Q8N7P7 452 aa10.26□□□□□ -0.77
SLIRP-211ENST00000557623 CHST4Q8NCG5 386 aa10.26□□□□□ -0.77
SLIRP-211ENST00000557623 OR4M1Q8NGD0 313 aa10.26□□□□□ -0.77
SLIRP-211ENST00000557623 SGCDQ92629 289 aa10.26□□□□□ -0.77
SLIRP-211ENST00000557623 UFD1Q92890 307 aa10.26□□□□□ -0.77
SLIRP-211ENST00000557623 DERL3Q96Q80 235 aa10.26□□□□□ -0.77
SLIRP-211ENST00000557623 METTL9Q9H1A3 318 aa10.26□□□□□ -0.77
SLIRP-211ENST00000557623 UNKLQ9H9P5 680 aaKnown RBP10.26□□□□□ -0.77
SLIRP-211ENST00000557623 SIRT7Q9NRC8 400 aa10.26□□□□□ -0.77
SLIRP-211ENST00000557623 IL36RNQ9UBH0 155 aa10.26□□□□□ -0.77
SLIRP-211ENST00000557623 A0A1W2PPK0 400 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 hADV38S2A0JD32 116 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 TMEM82A0PJX8 343 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 FUOMA2VDF0 154 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 MGST3O14880 152 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 DENRO43583 198 aaKnown RBP10.25□□□□□ -0.77
SLIRP-211ENST00000557623 OR2H2O95918 312 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 CSTBP04080 98 aaKnown RBP10.25□□□□□ -0.77
SLIRP-211ENST00000557623 ZNF44P15621 663 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 LMO1P25800 156 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 DUSP1P28562 367 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 BAMBIQ13145 260 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 IL13RA2Q14627 380 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 TRAM1Q15629 374 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 RUSC1-AS1Q66K80 236 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 ASCL4Q6XD76 172 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 C17orf107Q6ZR85 190 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 NKAIN3Q8N8D7 197 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 SPATA3Q8NHX4 192 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 FAM216AQ8WUB2 273 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 ORAI1Q96D31 301 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 ZNF48Q96MX3 618 aaPredicted RBP10.25□□□□□ -0.77
SLIRP-211ENST00000557623 C19orf24Q9BVV8 132 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 PRDM13Q9H4Q3 707 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 NOX4Q9NPH5 578 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 IL36GQ9NZH8 169 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 ING4Q9UNL4 249 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 MXRA5Q9NR99 2828 aa10.25□□□□□ -0.77
SLIRP-211ENST00000557623 TRAV8-7A0A075B6U6 113 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 MEGF11A6BM72 1044 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 RNASEK-C17orf49H0YIS7 233 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 SIRPB1O00241 398 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 DEGS1O15121 323 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 PSPNO60542 156 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 MRPS14O60783 128 aaKnown RBP10.24□□□□□ -0.77
SLIRP-211ENST00000557623 ZNF780AO75290 641 aaPredicted RBP10.24□□□□□ -0.77
SLIRP-211ENST00000557623 HTR3BO95264 441 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 MAS1P04201 325 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 HSMCR30P0CW71 290 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 PSMA1P25786 263 aaKnown RBP10.24□□□□□ -0.77
SLIRP-211ENST00000557623 ERP29P30040 261 aaKnown RBP10.24□□□□□ -0.77
SLIRP-211ENST00000557623 OR3A4PP47883 348 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 UBE2E1P51965 193 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 ERVFRD-1P60508 538 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 GABARAPL2P60520 117 aa10.24□□□□□ -0.77
SLIRP-211ENST00000557623 UBA52P62987 128 aaKnown RBP10.24□□□□□ -0.77
SLIRP-211ENST00000557623 MLLT11Q13015 90 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms