RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 MALLQ13021 153 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 CHAF1BQ13112 559 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 PHLDA2Q53GA4 152 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 PHYHD1Q5SRE7 291 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 Q6ZS49 121 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 C20orf196Q8IYI0 205 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 OR5L1Q8NGL2 311 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 MUCL1Q96DR8 90 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 SF3B5Q9BWJ5 86 aaKnown RBP14.13□□□□□ -0.15
SHMT2-232ENST00000557487 RBM24Q9BX46 236 aaKnown RBP14.13□□□□□ -0.15
SHMT2-232ENST00000557487 TOLLIPQ9H0E2 274 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 CHCHD2Q9Y6H1 151 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-232ENST00000557487 CCDC187A0A096LP49 1063 aa14.12□□□□□ -0.15
SHMT2-232ENST00000557487 YKT6O15498 198 aa14.12□□□□□ -0.15
SHMT2-232ENST00000557487 TXNL1O43396 289 aa14.12□□□□□ -0.15
SHMT2-232ENST00000557487 SCRG1O75711 98 aa14.12□□□□□ -0.15
SHMT2-232ENST00000557487 HBE1P02100 147 aa14.12□□□□□ -0.15
SHMT2-232ENST00000557487 ARG1P05089 322 aa14.12□□□□□ -0.15
SHMT2-232ENST00000557487 CST2P09228 141 aa14.12□□□□□ -0.15
SHMT2-232ENST00000557487 OR13C7P0DN81 318 aa14.12□□□□□ -0.15
SHMT2-232ENST00000557487 PPP1CCP36873 323 aaKnown RBP14.12□□□□□ -0.15
SHMT2-232ENST00000557487 FUT6P51993 359 aa14.12□□□□□ -0.15
SHMT2-232ENST00000557487 FOXL2P58012 376 aa14.12□□□□□ -0.15
SHMT2-232ENST00000557487 EXT1Q16394 746 aa14.12□□□□□ -0.15
SHMT2-232ENST00000557487 SNAI3Q3KNW1 292 aa14.12□□□□□ -0.15
SHMT2-232ENST00000557487 DMRTC1Q5HYR2 192 aa14.12□□□□□ -0.15
SHMT2-232ENST00000557487 GPR137CQ8N3F9 429 aa14.12□□□□□ -0.15
SHMT2-232ENST00000557487 OR10AD1Q8NGE0 317 aa14.12□□□□□ -0.15
SHMT2-232ENST00000557487 OR2G3Q8NGZ4 309 aa14.12□□□□□ -0.15
SHMT2-232ENST00000557487 RBMXL1Q96E39 390 aaKnown RBP14.12□□□□□ -0.15
SHMT2-232ENST00000557487 TMEM56Q96MV1 263 aa14.12□□□□□ -0.15
SHMT2-232ENST00000557487 PAPOLGQ9BWT3 736 aaKnown RBP14.12□□□□□ -0.15
SHMT2-232ENST00000557487 RARRES3Q9UL19 164 aa14.12□□□□□ -0.15
SHMT2-232ENST00000557487 TMEM56-RWDD3S4R434 201 aa14.12□□□□□ -0.15
SHMT2-232ENST00000557487 TRAV20A0A0B4J274 112 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 CCDC163A0A0D9SF12 145 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 C3orf85A0A1B0GTC6 90 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 FAM90A10PA6NDY2 464 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 FAM90A18PA6NE21 464 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 FAM90A16PA6NEW6 464 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 FAM90A20PA6NIJ5 464 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 FAM90A8PA6NJQ4 464 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 FAM90A7PA6NKC0 464 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 FAM90A22PA8MWA6 464 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 FAM90A12PA8MX19 464 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 FAM90A5PA8MXJ8 464 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 FAM90A23PA8MXZ1 464 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 ZNF732B4DXR9 585 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 MPPED1O15442 326 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 C1QL1O75973 258 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 HSPB1P04792 205 aaKnown RBP14.11□□□□□ -0.15
SHMT2-232ENST00000557487 FAM90A15PP0C7V4 464 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 FAM90A13PP0C7W8 464 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 FAM90A14PP0C7W9 464 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 FAM90A24PP0C7X0 464 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 TCN2P20062 427 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 NKX2-1P43699 371 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-232ENST00000557487 HTR5AP47898 357 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 CDX1P47902 265 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-232ENST00000557487 OR2B8PP59922 312 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 KRTAP27-1Q3LI81 207 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 CLEC9AQ6UXN8 241 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 SLC35G3Q8N808 338 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 SPSB2Q99619 263 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 TMEM222Q9H0R3 208 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 LYRM2Q9NU23 88 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-232ENST00000557487 TINAGQ9UJW2 476 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 SLC7A11Q9UPY5 501 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 CLEC18AA5D8T8 446 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 GJE1A6NN92 205 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 SYNGR3O43761 229 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 ANGPTL7O43827 346 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 NRASP01111 189 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 CEACAM1P13688 526 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 KLK2P20151 261 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 DSCR4P56555 118 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-232ENST00000557487 KIAA0141Q14154 515 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-232ENST00000557487 TGIF1Q15583 401 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 DNLZQ5SXM8 178 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 ZNF385CQ66K41 422 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-232ENST00000557487 WDR5BQ86VZ2 330 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 DTX1Q86Y01 620 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 CLEC18CQ8NCF0 446 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 OR10G4Q8NGN3 311 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 OR13D1Q8NGV5 346 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 OR1F12Q8NHA8 337 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 FBXO17Q96EF6 278 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 ZNF385AQ96PM9 386 aaKnown RBP14.11□□□□□ -0.15
SHMT2-232ENST00000557487 OPA3Q9H6K4 179 aa14.11□□□□□ -0.15
SHMT2-232ENST00000557487 RYDENQ9NUL5 291 aaKnown RBP14.11□□□□□ -0.15
SHMT2-232ENST00000557487 PUS1Q9Y606 427 aaKnown RBP eCLIP14.11□□□□□ -0.15
SHMT2-232ENST00000557487 IGKV1-27A0A075B6S5 117 aa14.1□□□□□ -0.15
SHMT2-232ENST00000557487 TGOLN2O43493 480 aa14.1□□□□□ -0.15
SHMT2-232ENST00000557487 SPRY1O43609 319 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-232ENST00000557487 PPYP01298 95 aa14.1□□□□□ -0.15
SHMT2-232ENST00000557487 DBHP09172 617 aa14.1□□□□□ -0.15
SHMT2-232ENST00000557487 FUT3P21217 361 aa14.1□□□□□ -0.15
SHMT2-232ENST00000557487 ATP6V0CP27449 155 aa14.1□□□□□ -0.15
SHMT2-232ENST00000557487 ZNF506Q5JVG8 444 aa14.1□□□□□ -0.15
SHMT2-232ENST00000557487 SP5Q6BEB4 398 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms