RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 CLDN34H7C241 214 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 M0R143 59 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 CD74P04233 296 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 POU2F2P09086 479 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 CST2P09228 141 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 PSG2P11465 335 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 LBX1P52954 281 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 SURF2Q15527 256 aaPredicted RBP4.38□□□□□ -1.71
SYNE2-223ENST00000557005 OR8G1Q15617 311 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 PTCRAQ6ISU1 281 aaPredicted RBP4.38□□□□□ -1.71
SYNE2-223ENST00000557005 RTN4RL2Q86UN3 420 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 LINC00469Q8N7U9 141 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 TM4SF19Q96DZ7 209 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 NOL4LQ96MY1 436 aaPredicted RBP4.38□□□□□ -1.71
SYNE2-223ENST00000557005 MS4A10Q96PG2 267 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 TAAR6Q96RI8 345 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 RTL8AQ9BWD3 113 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 MSGN1A6NI15 193 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 TNFSF14O43557 240 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 ACTL6AO96019 429 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 PGA4P0DJD7 388 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 PGA5P0DJD9 388 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 FSTP19883 344 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 EDDM3BP56851 147 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 TAS2R60P59551 318 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 P2RY6Q15077 328 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 LPAL2Q16609 132 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 VHLLQ6RSH7 139 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 CNEP1R1Q8N9A8 125 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 OR4C5Q8NGB2 326 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 OR10P1Q8NGE3 313 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 OR10G4Q8NGN3 311 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 OR10G9Q8NGN4 311 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 OR10G7Q8NGN6 311 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 ALX4Q9H161 411 aaPredicted RBP4.38□□□□□ -1.71
SYNE2-223ENST00000557005 Q9N2K0 584 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 FGF21Q9NSA1 209 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 PLA2G3Q9NZ20 509 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 TMED3Q9Y3Q3 217 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 SERTM2A0A1B0GWG4 89 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 CRYM-AS1A6NIL9 109 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 LIPT2A6NK58 231 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 OR5H1A6NKK0 313 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 WDR1O75083 606 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 SNRPCP09234 159 aaKnown RBP4.38□□□□□ -1.71
SYNE2-223ENST00000557005 ATP6V0CP27449 155 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 ARL3P36405 182 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 PPP1CCP36873 323 aaKnown RBP4.38□□□□□ -1.71
SYNE2-223ENST00000557005 ERVFC1-1P60608 527 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 RAB35Q15286 201 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 TMEM183BQ1AE95 376 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 LY6G6FQ5SQ64 297 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 RNASEKQ6P5S7 137 aaKnown RBP4.38□□□□□ -1.71
SYNE2-223ENST00000557005 LILRA6Q6PI73 481 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 TMEM92Q6UXU6 159 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 RBMXL3Q8N7X1 1067 aaKnown RBP4.38□□□□□ -1.71
SYNE2-223ENST00000557005 AQP10Q96PS8 301 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 ALKBH3Q96Q83 286 aaPredicted RBP4.38□□□□□ -1.71
SYNE2-223ENST00000557005 GPHA2Q96T91 129 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 VPS25Q9BRG1 176 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 STRADBQ9C0K7 418 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 FAM206AQ9NX38 181 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 IGHV3-43A0A0B4J1X8 118 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 OR10J4P0C629 311 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 IGHV3-43DP0DP04 118 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 COX5AP20674 150 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 PRDX4Q13162 271 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 TGIF2LXQ8IUE1 241 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 SLC26A10Q8NG04 563 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 IFI44Q8TCB0 444 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 GPBAR1Q8TDU6 330 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 DAZAP1Q96EP5 407 aaKnown RBP4.38□□□□□ -1.71
SYNE2-223ENST00000557005 SHDQ96IW2 340 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 CCL28Q9NRJ3 127 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 METTL1Q9UBP6 276 aaKnown RBP4.38□□□□□ -1.71
SYNE2-223ENST00000557005 ANXA10Q9UJ72 324 aa4.38□□□□□ -1.71
SYNE2-223ENST00000557005 KIR2DS1A0A191URI9 304 aa4.37□□□□□ -1.71
SYNE2-223ENST00000557005 ENSAO43768 121 aaKnown RBP4.37□□□□□ -1.71
SYNE2-223ENST00000557005 CA6P23280 308 aa4.37□□□□□ -1.71
SYNE2-223ENST00000557005 DDTP30046 118 aa4.37□□□□□ -1.71
SYNE2-223ENST00000557005 OR10J1P30954 320 aa4.37□□□□□ -1.71
SYNE2-223ENST00000557005 KIR2DS4P43632 304 aa4.37□□□□□ -1.71
SYNE2-223ENST00000557005 MMP16P51512 607 aa4.37□□□□□ -1.71
SYNE2-223ENST00000557005 RANP62826 216 aaKnown RBP4.37□□□□□ -1.71
SYNE2-223ENST00000557005 GNB1P62873 340 aa4.37□□□□□ -1.71
SYNE2-223ENST00000557005 FZD5Q13467 585 aa4.37□□□□□ -1.71
SYNE2-223ENST00000557005 KIR2DS1Q14954 304 aa4.37□□□□□ -1.71
SYNE2-223ENST00000557005 SLC10A1Q14973 349 aa4.37□□□□□ -1.71
SYNE2-223ENST00000557005 PLGLAQ15195 96 aa4.37□□□□□ -1.71
SYNE2-223ENST00000557005 CEBPEQ15744 281 aa4.37□□□□□ -1.71
SYNE2-223ENST00000557005 ZNF468Q5VIY5 522 aaPredicted RBP4.37□□□□□ -1.71
SYNE2-223ENST00000557005 RABEPKQ7Z6M1 372 aa4.37□□□□□ -1.71
SYNE2-223ENST00000557005 VASH2Q86V25 355 aa4.37□□□□□ -1.71
SYNE2-223ENST00000557005 SHISA5Q8N114 240 aa4.37□□□□□ -1.71
SYNE2-223ENST00000557005 OR10A7Q8NGE5 316 aa4.37□□□□□ -1.71
SYNE2-223ENST00000557005 IP6K3Q96PC2 410 aa4.37□□□□□ -1.71
SYNE2-223ENST00000557005 RTBDNQ9BSG5 229 aaPredicted RBP4.37□□□□□ -1.71
SYNE2-223ENST00000557005 SIRT7Q9NRC8 400 aa4.37□□□□□ -1.71
SYNE2-223ENST00000557005 ALG1L2C9J202 215 aa4.37□□□□□ -1.71
SYNE2-223ENST00000557005 E9PQ18 207 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms