RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 SNX22Q96L94 193 aa14.54□□□□□ -0.08
PSEN1-218ENST00000556864 C1orf147Q96MC9 270 aaPredicted RBP14.54□□□□□ -0.08
PSEN1-218ENST00000556864 SMR3AQ99954 134 aa14.54□□□□□ -0.08
PSEN1-218ENST00000556864 TMEM59Q9BXS4 323 aa14.54□□□□□ -0.08
PSEN1-218ENST00000556864 SPACA1Q9HBV2 294 aa14.54□□□□□ -0.08
PSEN1-218ENST00000556864 STEAP1Q9UHE8 339 aa14.54□□□□□ -0.08
PSEN1-218ENST00000556864 FAM90A10PA6NDY2 464 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 FAM90A18PA6NE21 464 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 FAM90A16PA6NEW6 464 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 FAM90A20PA6NIJ5 464 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 FAM90A8PA6NJQ4 464 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 FAM90A7PA6NKC0 464 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 IFITM5A6NNB3 132 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 FAM90A22PA8MWA6 464 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 FAM90A12PA8MX19 464 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 FAM90A5PA8MXJ8 464 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 FAM90A23PA8MXZ1 464 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 K7N7A8 449 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 AIPO00170 330 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 DEGS1O15121 323 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 NOL3O60936 208 aaKnown RBP14.53□□□□□ -0.08
PSEN1-218ENST00000556864 GABARAPO95166 117 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 OR2H2O95918 312 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 TK1P04183 234 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 FAM90A15PP0C7V4 464 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 FAM90A13PP0C7W8 464 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 FAM90A14PP0C7W9 464 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 FAM90A24PP0C7X0 464 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 ARSBP15848 533 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 OR10A3P58181 314 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 BTN2A1Q7KYR7 527 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 GDPD3Q7L5L3 318 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 OR8H2Q8N162 312 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 OR5D13Q8NGL4 314 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 RAB40AQ8WXH6 277 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 MRI1Q9BV20 369 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 IFT22Q9H7X7 185 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 METRNQ9UJH8 293 aa14.53□□□□□ -0.08
PSEN1-218ENST00000556864 C22orf46C9J442 243 aa14.52□□□□□ -0.09
PSEN1-218ENST00000556864 MGST3O14880 152 aa14.52□□□□□ -0.09
PSEN1-218ENST00000556864 ZNF737O75373 536 aa14.52□□□□□ -0.09
PSEN1-218ENST00000556864 OR7C1O76099 320 aaPredicted RBP14.52□□□□□ -0.09
PSEN1-218ENST00000556864 MPIG6BO95866 241 aa14.52□□□□□ -0.09
PSEN1-218ENST00000556864 HNF1AP20823 631 aa14.52□□□□□ -0.09
PSEN1-218ENST00000556864 SDC2P34741 201 aa14.52□□□□□ -0.09
PSEN1-218ENST00000556864 SCN1BQ07699 218 aa14.52□□□□□ -0.09
PSEN1-218ENST00000556864 GRK1Q15835 563 aa14.52□□□□□ -0.09
PSEN1-218ENST00000556864 HES5Q5TA89 166 aa14.52□□□□□ -0.09
PSEN1-218ENST00000556864 ANKRD13BQ86YJ7 626 aa14.52□□□□□ -0.09
PSEN1-218ENST00000556864 FAM46BQ96A09 425 aa14.52□□□□□ -0.09
PSEN1-218ENST00000556864 POM121Q96HA1 1249 aa14.52□□□□□ -0.09
PSEN1-218ENST00000556864 DMRTB1Q96MA1 342 aa14.52□□□□□ -0.09
PSEN1-218ENST00000556864 NUDT16L1Q9BRJ7 211 aaKnown RBP14.52□□□□□ -0.09
PSEN1-218ENST00000556864 DCTN5Q9BTE1 182 aa14.52□□□□□ -0.09
PSEN1-218ENST00000556864 SELENOIQ9C0D9 397 aa14.52□□□□□ -0.09
PSEN1-218ENST00000556864 BANF2Q9H503 90 aa14.52□□□□□ -0.09
PSEN1-218ENST00000556864 LPAR3Q9UBY5 353 aa14.52□□□□□ -0.09
PSEN1-218ENST00000556864 RPUSD1Q9UJJ7 312 aaKnown RBP14.52□□□□□ -0.09
PSEN1-218ENST00000556864 INSIG2Q9Y5U4 225 aa14.52□□□□□ -0.09
PSEN1-218ENST00000556864 A0A1W2PP11 408 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 A0A1W2PPH5 198 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 A0A1W2PQ09 198 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 TMEM82A0PJX8 343 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 FUOMA2VDF0 154 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 TMEM127O75204 238 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 LIPFP07098 398 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 VSIG8P0DPA2 414 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 KCNJ3P48549 501 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 LSM3P62310 102 aaKnown RBP14.51□□□□□ -0.09
PSEN1-218ENST00000556864 MXD1Q05195 221 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 FAM189A2Q15884 450 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 PAN3Q58A45 887 aaKnown RBP14.51□□□□□ -0.09
PSEN1-218ENST00000556864 GPR107Q5VW38 600 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 Q6P435 159 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 SFXN4Q6P4A7 337 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 CROCCP3Q8IVE0 287 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 TMEM104Q8NE00 496 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 C8orf46Q8TAG6 207 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 SLC25A28Q96A46 364 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 FAM3DQ96BQ1 224 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 Q96M66 194 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 URM1Q9BTM9 101 aaKnown RBP14.51□□□□□ -0.09
PSEN1-218ENST00000556864 GSX1Q9H4S2 264 aaPredicted RBP14.51□□□□□ -0.09
PSEN1-218ENST00000556864 RNF167Q9H6Y7 350 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 TMEM160Q9NX00 188 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 FBLN5Q9UBX5 448 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 HIVEP1P15822 2718 aa14.51□□□□□ -0.09
PSEN1-218ENST00000556864 A0A0G2JK05 382 aa14.5□□□□□ -0.09
PSEN1-218ENST00000556864 SMIM30A4D0T7 59 aa14.5□□□□□ -0.09
PSEN1-218ENST00000556864 TMEM14DPA8MWL7 114 aa14.5□□□□□ -0.09
PSEN1-218ENST00000556864 SLC33A1O00400 549 aaPredicted RBP14.5□□□□□ -0.09
PSEN1-218ENST00000556864 GEMIN2O14893 280 aaKnown RBP14.5□□□□□ -0.09
PSEN1-218ENST00000556864 FCN3O75636 299 aa14.5□□□□□ -0.09
PSEN1-218ENST00000556864 IL1AP01583 271 aa14.5□□□□□ -0.09
PSEN1-218ENST00000556864 CSN2P05814 226 aa14.5□□□□□ -0.09
PSEN1-218ENST00000556864 LMO1P25800 156 aa14.5□□□□□ -0.09
PSEN1-218ENST00000556864 OR3A1P47881 315 aa14.5□□□□□ -0.09
PSEN1-218ENST00000556864 CLDN12P56749 244 aa14.5□□□□□ -0.09
PSEN1-218ENST00000556864 EDDM3BP56851 147 aa14.5□□□□□ -0.09
PSEN1-218ENST00000556864 RPS27AP62979 156 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms