RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 OR3A4PP47883 348 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 F2RL1P55085 397 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 SNU13P55769 128 aaKnown RBP3.82□□□□□ -1.8
ATXN3-241ENST00000556374 LOXL3P58215 753 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 RAB2AP61019 212 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 HERV-K104P61576 105 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 SRPXP78539 464 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 HOXA4Q00056 320 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-241ENST00000556374 PJVKQ0ZLH3 352 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 ECH1Q13011 328 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 MYBPHQ13203 477 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 UNC119Q13432 240 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 PEA15Q15121 130 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 SGCAQ16586 387 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 MICBQ29980 383 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 PLPPR5Q32ZL2 321 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 KRTAP21-3Q3LHN1 58 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 SLC22A6Q4U2R8 563 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 PABPC1L2AQ5JQF8 200 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 AVPI1Q5T686 147 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 FAM69BQ5VUD6 431 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 ASPHD2Q6ICH7 369 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 WDR74Q6RFH5 385 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-241ENST00000556374 DRAM2Q6UX65 266 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 PLXDC2Q6UX71 529 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF813Q6ZN06 617 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 SHISA6Q6ZSJ9 500 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 ANKRD37Q7Z713 158 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 BIVMQ86UB2 503 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 TMEM200AQ86VY9 491 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 SKA3Q8IX90 412 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 PRR18Q8N4B5 295 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 FAM71E2Q8N5Q1 922 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 COMMD1Q8N668 190 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 DEFB119Q8N690 84 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 GVQW1Q8N7I0 195 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 ADAD2Q8NCV1 583 aaKnown RBP3.82□□□□□ -1.8
ATXN3-241ENST00000556374 PLPP5Q8NEB5 264 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 OR5AP2Q8NGF4 316 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 OR8B12Q8NGG6 310 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 OR6X1Q8NH79 312 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 STT3BQ8TCJ2 826 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 TMED6Q8WW62 240 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 RLN3Q8WXF3 142 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 DDB2Q92466 427 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 C10orf35Q96D05 121 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 CMBLQ96DG6 245 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 OXGR1Q96P68 337 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 NPAS1Q99742 590 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 TCEAL7Q9BRU2 100 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 CRB3Q9BUF7 120 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 EMC6Q9BV81 110 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 PBDC1Q9BVG4 233 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 SEC11CQ9BY50 192 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 RTN4RQ9BZR6 473 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 METTL9Q9H1A3 318 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 LPAR5Q9H1C0 372 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 RGCCQ9H4X1 137 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 BANF2Q9H503 90 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 PLEKHA2Q9HB19 425 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 TAF9BQ9HBM6 251 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF160Q9HCG1 818 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 FANCFQ9NPI8 374 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 GPR84Q9NQS5 396 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 GSKIPQ9P0R6 139 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 KLHL13Q9P2N7 655 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 CTSFQ9UBX1 484 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 LPAR3Q9UBY5 353 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 ATPIF1Q9UII2 106 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 PILRBQ9UKJ0 227 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 NXT1Q9UKK6 140 aaKnown RBP3.82□□□□□ -1.8
ATXN3-241ENST00000556374 RARRES3Q9UL19 164 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 ANAPC10Q9UM13 185 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 CARHSP1Q9Y2V2 147 aaKnown RBP3.82□□□□□ -1.8
ATXN3-241ENST00000556374 KCNIP3Q9Y2W7 256 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 PCNX1Q96RV3 2341 aa3.82□□□□□ -1.8
ATXN3-241ENST00000556374 DNHD1Q96M86 4753 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 IGLV3-32A0A0A0MS00 114 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 TRBV6-7A0A0A0MS04 114 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 PCP4L1A6NKN8 68 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 FAM74A7A6NL05 159 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 AQP7P3A6NL99 342 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 C1orf196B1AJZ1 125 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 C9J4A7 227 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 MS4A18H0YCH9 400 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 TRIM77I1YAP6 450 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 GPR31O00270 319 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 FGF16O43320 207 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 TRAF3IP2O43734 574 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-241ENST00000556374 SSX5O60225 188 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 EIF1BO60739 113 aaKnown RBP3.81□□□□□ -1.8
ATXN3-241ENST00000556374 RAD51DO75771 328 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 CST4P01036 141 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 PRH1P02810 166 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 CTSDP07339 412 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-241ENST00000556374 HOXB5P09067 269 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 QDPRP09417 244 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 PGA4P0DJD7 388 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 PGA3P0DJD8 388 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms