RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 SIGIRRQ6IA17 410 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 ENKURQ8TC29 256 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 NLKQ9UBE8 527 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 AK3Q9UIJ7 227 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 DYSFO75923 2080 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 TENM4Q6N022 2769 aa8.6□□□□□ -1.03
NEK9-205ENST00000555405 TMEM210A6NLX4 147 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 CLDN1O95832 211 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 OR2H2O95918 312 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 IGHV3-7P01780 117 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 CD3DP04234 171 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 NDUFB7P17568 137 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 AMY2BP19961 511 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 OR3A3P47888 321 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 MICBQ29980 383 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 MST1LQ2TV78 715 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 HFEQ30201 348 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 GCSAMQ8N6F7 178 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 YIPF5Q969M3 257 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 MMP28Q9H239 520 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 KCNK7Q9Y2U2 307 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 YLPM1P49750 1951 aaKnown RBP8.59□□□□□ -1.03
NEK9-205ENST00000555405 TRAV6A0A075B6T7 132 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 A0A1B0GW55 424 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 LRRC30A6NM36 301 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 TMPRSS2O15393 492 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 HAND1O96004 215 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 DUX4L2P0CJ85 424 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 DUX4L3P0CJ86 424 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 DUX4L4P0CJ87 422 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 DUX4L5P0CJ88 424 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 DUX4L6P0CJ89 424 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 DUX4L7P0CJ90 424 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 RAB6AP20340 208 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 CCR6P51684 374 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 TLE4Q04727 773 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 AESQ08117 197 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 ZNF260Q3ZCT1 412 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 DUX4L9Q6RFH8 374 aaPredicted RBP8.59□□□□□ -1.03
NEK9-205ENST00000555405 ZSCAN4Q8NAM6 433 aaPredicted RBP8.59□□□□□ -1.03
NEK9-205ENST00000555405 SUMF2Q8NBJ7 301 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 OR56B4Q8NH76 319 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 RFESDQ8TAC1 157 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 C11orf54Q9H0W9 315 aaPredicted RBP8.59□□□□□ -1.03
NEK9-205ENST00000555405 OCEL1Q9H607 264 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 DUX4Q9UBX2 424 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 IL19Q9UHD0 177 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 CREBBPQ92793 2442 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 UBR5O95071 2799 aaPredicted RBP8.59□□□□□ -1.03
NEK9-205ENST00000555405 IGHV1-69-2A0A0G2JMI3 117 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 OR2AT4A6NND4 320 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 PDCD6O75340 191 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 IFNA6P05013 189 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 PGA5P0DJD9 388 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 COL10A1Q03692 680 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 SMIM21Q3B7S5 101 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 CDH26Q8IXH8 852 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 FGFRL1Q8N441 504 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 H1FXQ92522 213 aaKnown RBP8.59□□□□□ -1.03
NEK9-205ENST00000555405 TMPRSS13Q9BYE2 586 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 PKIBQ9C010 78 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 RAB1BQ9H0U4 201 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 GLS2Q9UI32 602 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 TRAPPC2LQ9UL33 140 aa8.59□□□□□ -1.03
NEK9-205ENST00000555405 CENPXA8MT69 81 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 BET1O15155 118 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 PRDX2P32119 198 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 RSBN1Q5VWQ0 802 aaPredicted RBP8.58□□□□□ -1.04
NEK9-205ENST00000555405 ZNF782Q6ZMW2 699 aaPredicted RBP8.58□□□□□ -1.04
NEK9-205ENST00000555405 NRARPQ7Z6K4 114 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 OR4D10Q8NGI6 311 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 NRIP2Q9BQI9 281 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 DCTN5Q9BTE1 182 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 CBLN4Q9NTU7 201 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 WIPI2Q9Y4P8 454 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 MEIKINA0A087WXM9 373 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 GABARAPH6UMI1 98 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 GIFP27352 417 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 ARPC4P59998 168 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 FAM76BQ5HYJ3 339 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 ACP7Q6ZNF0 438 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 SMIM4Q8WVI0 70 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 TINAGL1Q9GZM7 467 aaPredicted RBP8.58□□□□□ -1.04
NEK9-205ENST00000555405 PRRC2AP48634 2157 aaKnown RBP8.58□□□□□ -1.04
NEK9-205ENST00000555405 AMY2AP04746 511 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 RLN1P04808 185 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 PSG2P11465 335 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 RCC1P18754 421 aaPredicted RBP8.58□□□□□ -1.04
NEK9-205ENST00000555405 GRK1Q15835 563 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 FAM189A2Q15884 450 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 FAM216BQ8N7L0 139 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 CCDC32Q9BV29 185 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 DPCDQ9BVM2 203 aaPredicted RBP8.58□□□□□ -1.04
NEK9-205ENST00000555405 TMEM106BQ9NUM4 274 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 PCDHB10Q9UN67 800 aa8.58□□□□□ -1.04
NEK9-205ENST00000555405 DOCK11Q5JSL3 2073 aa8.57□□□□□ -1.04
NEK9-205ENST00000555405 ZNF736B4DX44 427 aaPredicted RBP8.57□□□□□ -1.04
NEK9-205ENST00000555405 LYRM1O43325 122 aa8.57□□□□□ -1.04
NEK9-205ENST00000555405 ADAM20O43506 726 aa8.57□□□□□ -1.04
NEK9-205ENST00000555405 PSPNO60542 156 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms