RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 NELFAQ9H3P2 528 aa11.61□□□□□ -0.55
SIX1-203ENST00000554986 PLA2G3Q9NZ20 509 aa11.61□□□□□ -0.55
SIX1-203ENST00000554986 C14orf166Q9Y224 244 aaKnown RBP11.61□□□□□ -0.55
SIX1-203ENST00000554986 PUS1Q9Y606 427 aaKnown RBP eCLIP11.61□□□□□ -0.55
SIX1-203ENST00000554986 FRG2CA6NGY1 282 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 A8MWP6 167 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 B4DEV8 164 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 H3BQ15 152 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 LMX1BO60663 402 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 CXCL1P09341 107 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 CTLA4P16410 223 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 AMY2BP19961 511 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 FGF7P21781 194 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 GLRA1P23415 457 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 PTGER4P35408 488 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 SLC6A8P48029 635 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 GLIPR1P48060 266 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 NUTF2P61970 127 aaKnown RBP11.6□□□□□ -0.55
SIX1-203ENST00000554986 MFAP5Q13361 173 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 HNF4GQ14541 408 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 ACKR1Q16570 336 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 ABHD17BQ5VST6 288 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 OR5D14Q8NGL3 314 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 RAB39BQ96DA2 213 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 NDUFAF3Q9BU61 184 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 MRPL37Q9BZE1 423 aaKnown RBP11.6□□□□□ -0.55
SIX1-203ENST00000554986 HIPK2Q9H2X6 1198 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 PTGES2Q9H7Z7 377 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 MMP24Q9Y5R2 645 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 CACNA1BQ00975 2339 aa11.6□□□□□ -0.55
SIX1-203ENST00000554986 TMEM269A0A1B0GVZ9 245 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 RAMP1O60894 148 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 CA11O75493 328 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 PI3P19957 117 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 TAGLN2P37802 199 aaKnown RBP11.59□□□□□ -0.55
SIX1-203ENST00000554986 OR3A2P47893 321 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 SSR4P51571 173 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 DCAF7P61962 342 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 NHLH2Q02577 135 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 JOSD1Q15040 202 aaPredicted RBP11.59□□□□□ -0.55
SIX1-203ENST00000554986 CD226Q15762 336 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 IGFL2Q6UWQ7 119 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 SLC35E3Q7Z769 313 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 TMEM156Q8N614 296 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 MFSD8Q8NHS3 518 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 C1orf147Q96MC9 270 aaPredicted RBP11.59□□□□□ -0.55
SIX1-203ENST00000554986 NICN1Q9BSH3 213 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 WFDC1Q9HC57 220 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 DECR2Q9NUI1 292 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 EML6Q6ZMW3 1958 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 RBFOX3A6NFN3 312 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 P2RY10O00398 339 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 HSD17B6O14756 317 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 PRH1P02810 166 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 CTSDP07339 412 aaPredicted RBP11.59□□□□□ -0.55
SIX1-203ENST00000554986 RAB4AP20338 218 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 APOBEC1P41238 236 aaKnown RBP11.59□□□□□ -0.55
SIX1-203ENST00000554986 TMEM50BP56557 158 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 GGNBP1Q5YKI7 109 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 SP5Q6BEB4 398 aaPredicted RBP11.59□□□□□ -0.55
SIX1-203ENST00000554986 PCSK4Q6UW60 755 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 MARCH3Q86UD3 253 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 SMIM3Q9BZL3 60 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 PARP12Q9H0J9 701 aaKnown RBP11.59□□□□□ -0.55
SIX1-203ENST00000554986 TMEM242Q9NWH2 141 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 KIAA1456Q9P272 454 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 CACNA1CQ13936 2221 aa11.59□□□□□ -0.55
SIX1-203ENST00000554986 SMCO3A2RU48 225 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 CDC14BO60729 498 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 HSPB1P04792 205 aaKnown RBP11.58□□□□□ -0.56
SIX1-203ENST00000554986 SRP19P09132 144 aaKnown RBP11.58□□□□□ -0.56
SIX1-203ENST00000554986 IL2RGP31785 369 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 ZNF93P35789 620 aaPredicted RBP11.58□□□□□ -0.56
SIX1-203ENST00000554986 ERVFRD-1P60508 538 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 UBE2KP61086 200 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 PLCXD2Q0VAA5 305 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 IL13RA2Q14627 380 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 PPA1Q15181 289 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 OR2T2Q6IF00 324 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 FOXRED2Q8IWF2 684 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 SGPP2Q8IWX5 399 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 FAM89BQ8N5H3 189 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 SLC26A10Q8NG04 563 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 OR10G4Q8NGN3 311 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 RNF133Q8WVZ7 376 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 TVP23CQ96ET8 276 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 ADAT3Q96EY9 351 aaPredicted RBP11.58□□□□□ -0.56
SIX1-203ENST00000554986 PACRGQ96M98 296 aaPredicted RBP11.58□□□□□ -0.56
SIX1-203ENST00000554986 SIGLEC12Q96PQ1 595 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 SOX7Q9BT81 388 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 ACTR3CQ9C0K3 210 aaPredicted RBP11.58□□□□□ -0.56
SIX1-203ENST00000554986 FAM206AQ9NX38 181 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 PITPNC1Q9UKF7 332 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 CRYM-AS1A6NIL9 109 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 SOCS1O15524 211 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 RAD51DO75771 328 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 PPP1CCP36873 323 aaKnown RBP11.58□□□□□ -0.56
SIX1-203ENST00000554986 FHITP49789 147 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 RND2P52198 227 aa11.58□□□□□ -0.56
SIX1-203ENST00000554986 FBXW4P57775 412 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms