RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 PP6455Q8WZ26 134 aa10.46□□□□□ -0.73
SHMT2-214ENST00000554604 FAHD2AQ96GK7 314 aa10.46□□□□□ -0.73
SHMT2-214ENST00000554604 OR2V2Q96R30 315 aa10.46□□□□□ -0.73
SHMT2-214ENST00000554604 TMEM106BQ9NUM4 274 aa10.46□□□□□ -0.73
SHMT2-214ENST00000554604 NUDT15Q9NV35 164 aa10.46□□□□□ -0.73
SHMT2-214ENST00000554604 ZNF107Q9UII5 783 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-214ENST00000554604 ZNF391Q9UJN7 358 aa10.46□□□□□ -0.73
SHMT2-214ENST00000554604 PCDHB10Q9UN67 800 aa10.46□□□□□ -0.73
SHMT2-214ENST00000554604 TMEM14DPA8MWL7 114 aa10.45□□□□□ -0.74
SHMT2-214ENST00000554604 GMDSO60547 372 aa10.45□□□□□ -0.74
SHMT2-214ENST00000554604 UBBP0CG47 229 aa10.45□□□□□ -0.74
SHMT2-214ENST00000554604 VSIG8P0DPA2 414 aa10.45□□□□□ -0.74
SHMT2-214ENST00000554604 PTHLHP12272 177 aa10.45□□□□□ -0.74
SHMT2-214ENST00000554604 SELEP16581 610 aa10.45□□□□□ -0.74
SHMT2-214ENST00000554604 ANOS1P23352 680 aa10.45□□□□□ -0.74
SHMT2-214ENST00000554604 RBMXP38159 391 aaKnown RBP10.45□□□□□ -0.74
SHMT2-214ENST00000554604 CCR6P51684 374 aa10.45□□□□□ -0.74
SHMT2-214ENST00000554604 ACTBP60709 375 aa10.45□□□□□ -0.74
SHMT2-214ENST00000554604 ACTG1P63261 375 aa10.45□□□□□ -0.74
SHMT2-214ENST00000554604 SCGB2A2Q13296 93 aa10.45□□□□□ -0.74
SHMT2-214ENST00000554604 FAM189A2Q15884 450 aa10.45□□□□□ -0.74
SHMT2-214ENST00000554604 OR10AD1Q8NGE0 317 aa10.45□□□□□ -0.74
SHMT2-214ENST00000554604 FAM46BQ96A09 425 aa10.45□□□□□ -0.74
SHMT2-214ENST00000554604 NKX3-1Q99801 234 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-214ENST00000554604 C1QTNF5Q9BXJ0 243 aa10.45□□□□□ -0.74
SHMT2-214ENST00000554604 GHITMQ9H3K2 345 aa10.45□□□□□ -0.74
SHMT2-214ENST00000554604 MRPL15Q9P015 296 aaKnown RBP10.45□□□□□ -0.74
SHMT2-214ENST00000554604 GHRLQ9UBU3 117 aa10.45□□□□□ -0.74
SHMT2-214ENST00000554604 METRNQ9UJH8 293 aa10.45□□□□□ -0.74
SHMT2-214ENST00000554604 NPTNQ9Y639 398 aa10.45□□□□□ -0.74
SHMT2-214ENST00000554604 TRAV6A0A075B6T7 132 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 A0A0A6YYJ9 748 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 C5orf63A6NC05 138 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 IQCF6A8MYZ5 107 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 PRAF2O60831 178 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 LPLP06858 475 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 UNC119Q13432 240 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 GFOD2Q3B7J2 385 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 ZFP69Q49AA0 526 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 AWAT2Q6E213 333 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 COLCA1Q6ZS62 124 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 MRPL21Q7Z2W9 205 aaKnown RBP10.44□□□□□ -0.74
SHMT2-214ENST00000554604 ANGPTL5Q86XS5 388 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 SPICQ8N5J4 248 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 TEX29Q8N6K0 151 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 TMEM229BQ8NBD8 167 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 SGK3Q96BR1 496 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 SEH1LQ96EE3 360 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 CHST5Q9GZS9 411 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 C20orf85Q9H1P6 137 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 RGCCQ9H4X1 137 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 NEK6Q9HC98 313 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 TMEM100Q9NV29 134 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 DCAF16Q9NXF7 216 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 ING3Q9NXR8 418 aa10.44□□□□□ -0.74
SHMT2-214ENST00000554604 MRPS28Q9Y2Q9 187 aaKnown RBP10.44□□□□□ -0.74
SHMT2-214ENST00000554604 IGKV1-9A0A0C4DH69 117 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 IFNL4K9M1U5 179 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 RAB27BO00194 218 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 TCF21O43680 179 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 PEX14O75381 377 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 NDUFB6O95139 128 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 IGHV2-70P01814 119 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 CHRM2P08172 466 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 MELTFP08582 738 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 HCKP08631 526 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 AKAIN1P0CW23 69 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 MECP2P51608 486 aaKnown RBP10.43□□□□□ -0.74
SHMT2-214ENST00000554604 PRSS12P56730 875 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 LCN2P80188 198 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 GUCA2AQ02747 115 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 CBX3Q13185 183 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 GK2Q14410 553 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-214ENST00000554604 KCNJ8Q15842 424 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 SNAI3Q3KNW1 292 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 ZNF260Q3ZCT1 412 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 DCAF12L2Q5VW00 463 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 CD276Q5ZPR3 534 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 SFRP4Q6FHJ7 346 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-214ENST00000554604 OR10K2Q6IF99 312 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 PNLDC1Q8NA58 520 aaKnown RBP10.43□□□□□ -0.74
SHMT2-214ENST00000554604 KCNG3Q8TAE7 436 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 AQP3Q92482 292 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 ITFG2Q969R8 447 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 C1orf147Q96MC9 270 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-214ENST00000554604 RANGRFQ9HD47 186 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-214ENST00000554604 GCM1Q9NP62 436 aa10.43□□□□□ -0.74
SHMT2-214ENST00000554604 LRRC30A6NM36 301 aa10.42□□□□□ -0.74
SHMT2-214ENST00000554604 F5H5P2 479 aa10.42□□□□□ -0.74
SHMT2-214ENST00000554604 H0YL77 283 aa10.42□□□□□ -0.74
SHMT2-214ENST00000554604 XRCC2O43543 280 aa10.42□□□□□ -0.74
SHMT2-214ENST00000554604 GATA3P23771 443 aa10.42□□□□□ -0.74
SHMT2-214ENST00000554604 MDH2P40926 338 aaKnown RBP10.42□□□□□ -0.74
SHMT2-214ENST00000554604 TAS2R19P59542 299 aa10.42□□□□□ -0.74
SHMT2-214ENST00000554604 SRSF2Q01130 221 aaKnown RBP10.42□□□□□ -0.74
SHMT2-214ENST00000554604 KRTAP24-1Q3LI83 254 aa10.42□□□□□ -0.74
SHMT2-214ENST00000554604 MOGAT2Q3SYC2 334 aa10.42□□□□□ -0.74
SHMT2-214ENST00000554604 GLIPR1L1Q6UWM5 242 aa10.42□□□□□ -0.74
SHMT2-214ENST00000554604 SEMA6DQ8NFY4 1073 aa10.42□□□□□ -0.74
SHMT2-214ENST00000554604 OR4C16Q8NGL9 310 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms