RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 TMPRSS11FQ6ZWK6 438 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF767PQ75MW2 155 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 LINC01561Q8N1V8 128 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 RAB42Q8N4Z0 105 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 TMEM178AQ8NBL3 297 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 SLC16A11Q8NCK7 471 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 TMEM52Q8NDY8 209 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 BEST4Q8NFU0 473 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 OR4M2Q8NGB6 313 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 OR52N4Q8NGI2 321 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 OR5AR1Q8NGP9 310 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 OR2A1Q8NGT9 310 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 PLPPR1Q8TBJ4 325 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 UBASH3BQ8TF42 649 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 RNF138Q8WVD3 245 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 HPSE2Q8WWQ2 592 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 SARAFQ96BY9 339 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 SMIM19Q96E16 107 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 RAB3CQ96E17 227 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 CMTM7Q96FZ5 175 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 AURKBQ96GD4 344 aaPredicted RBP2.32□□□□□ -2.04
PRPF39-206ENST00000554429 TEX37Q96LM6 180 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 BIRC8Q96P09 236 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 OR2A5Q96R48 311 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 URM1Q9BTM9 101 aaKnown RBP2.32□□□□□ -2.04
PRPF39-206ENST00000554429 NXF5Q9H1B4 397 aaKnown RBP2.32□□□□□ -2.04
PRPF39-206ENST00000554429 MAP1LC3AQ9H492 121 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 C19orf25Q9UFG5 118 aaPredicted RBP2.32□□□□□ -2.04
PRPF39-206ENST00000554429 PRSS21Q9Y6M0 314 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 UTP20O75691 2785 aaKnown RBP2.32□□□□□ -2.04
PRPF39-206ENST00000554429 SPENQ96T58 3664 aaKnown RBP2.32□□□□□ -2.04
PRPF39-206ENST00000554429 ZGRF1Q86YA3 2104 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 PRRC2AP48634 2157 aaKnown RBP2.32□□□□□ -2.04
PRPF39-206ENST00000554429 LINC00862A6NCI5 91 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 FRG2CA6NGY1 282 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 IDSB3KWA1 339 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 TRDCB7Z8K6 153 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 G3V2L1 256 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 C19orf84I3L1E1 186 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 CLIC1O00299 241 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 MANBAO00462 879 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF195O14628 629 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 MRASO14807 208 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 PHF1O43189 567 aaPredicted RBP2.32□□□□□ -2.04
PRPF39-206ENST00000554429 PRKNO60260 465 aaPredicted RBP2.32□□□□□ -2.04
PRPF39-206ENST00000554429 SLC16A7O60669 478 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 GADD45GO95257 159 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 PTTG1O95997 202 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 OXTP01178 125 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 IFNA1P01562 189 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 IGHG3P01860 377 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 ESR1P03372 595 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 C8GP07360 202 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 SFTPBP07988 381 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 AQP1P29972 269 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 CHRNB4P30926 498 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 DUTP33316 252 aaKnown RBP2.32□□□□□ -2.04
PRPF39-206ENST00000554429 OR3A2P47893 321 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 REG1BP48304 166 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 ERVFRD-1P60508 538 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 CDC42P60953 191 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 NCS1P62166 190 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 ARG2P78540 354 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 EMX2Q04743 252 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 ABRAXAS2Q15018 415 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 OXA1LQ15070 435 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 CCSMST1Q4G0I0 132 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 OCIAD2Q56VL3 154 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 CPTPQ5TA50 214 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 Q71RC1 249 aaPredicted RBP2.32□□□□□ -2.04
PRPF39-206ENST00000554429 SLC29A4Q7RTT9 530 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 ANKRD37Q7Z713 158 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 PIANPQ8IYJ0 282 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 OR52B6Q8NGF0 335 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 OR13C4Q8NGS5 318 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 OR13J1Q8NGT2 312 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 OR51F2Q8NH61 342 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 OR4S2Q8NH73 311 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 CNIH3Q8TBE1 160 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 NT5CQ8TCD5 201 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 ZFP90Q8TF47 636 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 ADTRPQ96IZ2 230 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 TXNDC15Q96J42 360 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 KIRREL1Q96J84 757 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 CMSS1Q9BQ75 279 aaKnown RBP2.32□□□□□ -2.04
PRPF39-206ENST00000554429 SHARPINQ9H0F6 387 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 RBM38Q9H0Z9 239 aaKnown RBP2.32□□□□□ -2.04
PRPF39-206ENST00000554429 OR51I1Q9H343 314 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 Q9H521 79 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 FAM96AQ9H5X1 160 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 JKAMPQ9P055 326 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 JPT1Q9UK76 154 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 TNFSF18Q9UNG2 199 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 A3GALT2U3KPV4 340 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 X6R8D5 127 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 SPTBN1Q01082 2364 aaKnown RBP2.32□□□□□ -2.04
PRPF39-206ENST00000554429 CACNA1CQ13936 2221 aa2.32□□□□□ -2.04
PRPF39-206ENST00000554429 MEIKINA0A087WXM9 373 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 IGKV3D-11A0A0A0MRZ8 115 aa2.31□□□□□ -2.04
PRPF39-206ENST00000554429 IGKV1-8A0A0C4DH67 115 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms