RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 PNLIPRP3Q17RR3 467 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 DEFB113Q30KQ7 82 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 FAM131AQ6UXB0 335 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 Q6ZTK2 550 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 NLRC3Q7RTR2 1065 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 OR4M1Q8NGD0 313 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 MED30Q96HR3 178 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 NICN1Q9BSH3 213 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 FAM234AQ9H0X4 552 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 PLEKHJ1Q9NW61 149 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 TREM2Q9NZC2 230 aa12.16□□□□□ -0.46
SHMT2-210ENST00000553950 FUOMA2VDF0 154 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 ISPDA4D126 451 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 RFPL4AA6NLU0 287 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 POM121CA8CG34 1229 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 FOXI3A8MTJ6 420 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-210ENST00000553950 MCRIP1C9JLW8 97 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 RFPL4AL1F8VTS6 287 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 MFNGO00587 321 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 CTDSPLO15194 276 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 OR2H2O95918 312 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 CSN2P05814 226 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 PRDX2P32119 198 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 IL13RA1P78552 427 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 PLA2G7Q13093 441 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 LSAMPQ13449 338 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 ZNF846Q147U1 533 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 PAN3Q58A45 887 aaKnown RBP12.15□□□□□ -0.46
SHMT2-210ENST00000553950 NKAPLQ5M9Q1 402 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 ATAD3CQ5T2N8 411 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 ATPAF1Q5TC12 328 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-210ENST00000553950 ANGPTL6Q8NI99 470 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 NEK7Q8TDX7 302 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 FAM168AQ92567 244 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 PERPQ96FX8 193 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 SDSLQ96GA7 329 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 SCPEP1Q9HB40 452 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 AKIP1Q9NQ31 210 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 IL36RNQ9UBH0 155 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 KAAG1Q9UBP8 84 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 ZNF222Q9UK12 451 aa12.15□□□□□ -0.46
SHMT2-210ENST00000553950 ANKRD17O75179 2603 aaKnown RBP12.14□□□□□ -0.47
SHMT2-210ENST00000553950 IGKV1D-17A0A075B6S4 117 aa12.14□□□□□ -0.47
SHMT2-210ENST00000553950 TRAV18A0A075B6X5 111 aa12.14□□□□□ -0.47
SHMT2-210ENST00000553950 A0A0A6YYD4 124 aa12.14□□□□□ -0.47
SHMT2-210ENST00000553950 SULT1C2O00338 296 aa12.14□□□□□ -0.47
SHMT2-210ENST00000553950 SIGLEC5O15389 551 aa12.14□□□□□ -0.47
SHMT2-210ENST00000553950 SOCS1O15524 211 aa12.14□□□□□ -0.47
SHMT2-210ENST00000553950 SSX4O60224 188 aa12.14□□□□□ -0.47
SHMT2-210ENST00000553950 COL8A2P25067 703 aa12.14□□□□□ -0.47
SHMT2-210ENST00000553950 CBX5P45973 191 aa12.14□□□□□ -0.47
SHMT2-210ENST00000553950 GABRA2P47869 451 aa12.14□□□□□ -0.47
SHMT2-210ENST00000553950 GNG2P59768 71 aa12.14□□□□□ -0.47
SHMT2-210ENST00000553950 PAX5Q02548 391 aa12.14□□□□□ -0.47
SHMT2-210ENST00000553950 SCN1BQ07699 218 aa12.14□□□□□ -0.47
SHMT2-210ENST00000553950 ZMYND11Q15326 602 aa12.14□□□□□ -0.47
SHMT2-210ENST00000553950 SFRP4Q6FHJ7 346 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-210ENST00000553950 Q6P435 159 aa12.14□□□□□ -0.47
SHMT2-210ENST00000553950 ASCC1Q8N9N2 400 aaKnown RBP12.14□□□□□ -0.47
SHMT2-210ENST00000553950 OR5D13Q8NGL4 314 aa12.14□□□□□ -0.47
SHMT2-210ENST00000553950 ARHGAP5-AS1Q96IT6 56 aa12.14□□□□□ -0.47
SHMT2-210ENST00000553950 SNX22Q96L94 193 aa12.14□□□□□ -0.47
SHMT2-210ENST00000553950 LURAP1Q96LR2 239 aa12.14□□□□□ -0.47
SHMT2-210ENST00000553950 DPCDQ9BVM2 203 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-210ENST00000553950 RIMS4Q9H426 269 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-210ENST00000553950 C12orf4Q9NQ89 552 aa12.14□□□□□ -0.47
SHMT2-210ENST00000553950 DCAF16Q9NXF7 216 aa12.14□□□□□ -0.47
SHMT2-210ENST00000553950 MIOXQ9UGB7 285 aa12.14□□□□□ -0.47
SHMT2-210ENST00000553950 IGHV3OR15-7A0A075B7D8 119 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 SIRPB1O00241 398 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 SLC33A1O00400 549 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-210ENST00000553950 GYPAP02724 150 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 HEXAP06865 529 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 CD3GP09693 182 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 CD40LGP29965 261 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 COL10A1Q03692 680 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 MOGAT2Q3SYC2 334 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 LRRC10Q5BKY1 277 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 HACD4Q5VWC8 232 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 ZNF788Q6ZQV5 615 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 MOB1BQ7L9L4 216 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 TGIF2LYQ8IUE0 185 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 OR8H2Q8N162 312 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 ZNF525Q8N782 197 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 GDPD1Q8N9F7 314 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 SUMF2Q8NBJ7 301 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 PECRQ9BY49 303 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 LIME1Q9H400 295 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 AUNIPQ9H7T9 357 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 LPAR3Q9UBY5 353 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 MGAT4AQ9UM21 535 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 V9GYH0 126 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 BAHCC1Q9P281 2608 aa12.13□□□□□ -0.47
SHMT2-210ENST00000553950 DOCK11Q5JSL3 2073 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 LYNX1G3V0Z9 82 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 GABARAPH6UMI1 98 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 MGST3O14880 152 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 GPR37O15354 613 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 TMPRSS2O15393 492 aa12.12□□□□□ -0.47
SHMT2-210ENST00000553950 ADAM20O43506 726 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms