RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 SPRY3O43610 288 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 CTAG2O75638 210 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 RBBP9O75884 186 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 NXPH2O95156 264 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 PTBP3O95758 552 aaKnown RBP4.23□□□□□ -1.73
VTI1B-202ENST00000553619 ECDO95905 644 aaPredicted RBP4.23□□□□□ -1.73
VTI1B-202ENST00000553619 IGHV1-46P01743 117 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 EIF4EP06730 217 aaKnown RBP4.23□□□□□ -1.73
VTI1B-202ENST00000553619 HNRNPCP07910 306 aaKnown RBP eCLIP4.23□□□□□ -1.73
VTI1B-202ENST00000553619 MGMTP16455 207 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 IGFBP2P18065 325 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 FUT3P21217 361 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 GLRA1P23415 457 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 BLVRBP30043 206 aaPredicted RBP4.23□□□□□ -1.73
VTI1B-202ENST00000553619 PRSS3P35030 304 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 PMELP40967 661 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 CBX5P45973 191 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 VEGFCP49767 419 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 PPOXP50336 477 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 AP3S2P59780 193 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 FGF12P61328 243 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 RPS27AP62979 156 aaKnown RBP4.23□□□□□ -1.73
VTI1B-202ENST00000553619 QRFPP83859 136 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 TLE4Q04727 773 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 SSBP1Q04837 148 aaKnown RBP4.23□□□□□ -1.73
VTI1B-202ENST00000553619 SCN1BQ07699 218 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 ZNF154Q13106 437 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 MAB21L1Q13394 359 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 DCTN2Q13561 401 aaKnown RBP4.23□□□□□ -1.73
VTI1B-202ENST00000553619 SNTB1Q13884 538 aaKnown RBP4.23□□□□□ -1.73
VTI1B-202ENST00000553619 RBM39Q14498 530 aaKnown RBP4.23□□□□□ -1.73
VTI1B-202ENST00000553619 IL13RA2Q14627 380 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 KCNJ8Q15842 424 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 PNLIPRP3Q17RR3 467 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 ZNF181Q2M3W8 571 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 MPV17LQ2QL34 196 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 CDNFQ49AH0 187 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 DMRTC1Q5HYR2 192 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 NHLRC3Q5JS37 347 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 SPIN3Q5JUX0 258 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 TRIQKQ629K1 86 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 Q6ZR03 302 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 Q6ZRM9 215 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 PEG10Q86TG7 708 aaKnown RBP4.23□□□□□ -1.73
VTI1B-202ENST00000553619 LRP11Q86VZ4 500 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 FAM90A1Q86YD7 464 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 LAX1Q8IWV1 398 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 OR8H2Q8N162 312 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 FAM58AQ8N1B3 248 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 Q8N402 240 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 FAM89BQ8N5H3 189 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 POC1AQ8NBT0 407 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 OR5D18Q8NGL1 313 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 HPSE2Q8WWQ2 592 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 DEDD2Q8WXF8 326 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 ST8SIA2Q92186 375 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 EMG1Q92979 244 aaKnown RBP4.23□□□□□ -1.73
VTI1B-202ENST00000553619 SLAMF9Q96A28 289 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 RAB3CQ96E17 227 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 OR2V2Q96R30 315 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 VRK1Q99986 396 aaPredicted RBP4.23□□□□□ -1.73
VTI1B-202ENST00000553619 SOSTQ9BQB4 213 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 TLNRD1Q9H1K6 362 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 MIXL1Q9H2W2 232 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 RIMS4Q9H426 269 aaPredicted RBP4.23□□□□□ -1.73
VTI1B-202ENST00000553619 PPP1R3EQ9H7J1 279 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 SCPEP1Q9HB40 452 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 AKIP1Q9NQ31 210 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 C1orf123Q9NWV4 160 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 RNF7Q9UBF6 113 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 HSF4Q9ULV5 492 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 PPP1R3CQ9UQK1 317 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 PRELID1Q9Y255 219 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 ST3GAL6Q9Y274 331 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 PLEKHA6Q9Y2H5 1048 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 DYSFO75923 2080 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 UNC79Q9P2D8 2635 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 DCHS1Q96JQ0 3298 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 A0A0A6YYJ9 748 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 A0A0B4J203 849 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 FUOMA2VDF0 154 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 MCRIP1C9JLW8 97 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 GABARAPH6UMI1 98 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 RAB27BO00194 218 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 DEGS1O15121 323 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 MLNRO43193 412 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 NDUFA2O43678 99 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 GSTZ1O43708 216 aaPredicted RBP4.22□□□□□ -1.73
VTI1B-202ENST00000553619 ANGPTL7O43827 346 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 CA11O75493 328 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 PLAUP00749 431 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 MELTFP08582 738 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 CD3GP09693 182 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 PGA5P0DJD9 388 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 PLA2G2AP14555 144 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 GYPEP15421 78 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 PRKACAP17612 351 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 BCL3P20749 454 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 CDK2P24941 298 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 LOXP28300 417 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms