RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 SLC7A11Q9UPY5 501 aa10.76□□□□□ -0.69
HDAC7-230ENST00000552960 G3V3Y1 287 aa10.76□□□□□ -0.69
HDAC7-230ENST00000552960 H3BQ15 152 aa10.76□□□□□ -0.69
HDAC7-230ENST00000552960 CYB5BO43169 146 aa10.76□□□□□ -0.69
HDAC7-230ENST00000552960 GPR137BO60478 399 aa10.76□□□□□ -0.69
HDAC7-230ENST00000552960 PGA4P0DJD7 388 aa10.76□□□□□ -0.69
HDAC7-230ENST00000552960 PGA3P0DJD8 388 aa10.76□□□□□ -0.69
HDAC7-230ENST00000552960 PNLIPP16233 465 aa10.76□□□□□ -0.69
HDAC7-230ENST00000552960 HTR5AP47898 357 aa10.76□□□□□ -0.69
HDAC7-230ENST00000552960 NKAIN1Q4KMZ8 207 aa10.76□□□□□ -0.69
HDAC7-230ENST00000552960 SPIN3Q5JUX0 258 aa10.76□□□□□ -0.69
HDAC7-230ENST00000552960 SLC22A25Q6T423 547 aa10.76□□□□□ -0.69
HDAC7-230ENST00000552960 FIP1L1Q6UN15 594 aaKnown RBP10.76□□□□□ -0.69
HDAC7-230ENST00000552960 GPR61Q9BZJ8 451 aa10.76□□□□□ -0.69
HDAC7-230ENST00000552960 AK3Q9UIJ7 227 aa10.76□□□□□ -0.69
HDAC7-230ENST00000552960 TUBD1Q9UJT1 453 aa10.76□□□□□ -0.69
HDAC7-230ENST00000552960 CPAMD8Q8IZJ3 1885 aa10.76□□□□□ -0.69
HDAC7-230ENST00000552960 TRBV11-1A0A0K0K1C0 115 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 SLC34A2O95436 690 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 PPA1Q15181 289 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 SPNS3Q6ZMD2 512 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 FAM89BQ8N5H3 189 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 RHBDD1Q8TEB9 315 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 RAB39BQ96DA2 213 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 NAA60Q9H7X0 242 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 TUBA4BQ9H853 241 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 GFOD1Q9NXC2 390 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 TGIF2-C20orf24A0A0A6YYL0 155 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 PPIHO43447 177 aaKnown RBP10.75□□□□□ -0.69
HDAC7-230ENST00000552960 HEXBP07686 556 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 GAMTQ14353 236 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 SURF2Q15527 256 aaPredicted RBP10.75□□□□□ -0.69
HDAC7-230ENST00000552960 RHBDD2Q6NTF9 364 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 CCDC54Q8NEL0 328 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 OR10G3Q8NGC4 313 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 SCRT1Q9BWW7 348 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 SLC2A9Q9NRM0 540 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 CCDC187A0A096LP49 1063 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 RBFOX3A6NFN3 312 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 ZNF724A8MTY0 619 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 MDKP21741 143 aaPredicted RBP10.75□□□□□ -0.69
HDAC7-230ENST00000552960 DUSP1P28562 367 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 RUNX1Q01196 453 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 COMMD1Q8N668 190 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 LYPD6BQ8NI32 183 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 NECAP2Q9NVZ3 263 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 HDGFL3Q9Y3E1 203 aa10.75□□□□□ -0.69
HDAC7-230ENST00000552960 CELA2AP08217 269 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 CXCL1P09341 107 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 ATP6V0CP27449 155 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 DLK1P80370 383 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 HEPN1Q6WQI6 88 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 C5orf24Q7Z6I8 188 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 SLC39A7Q92504 469 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 MVB12AQ96EY5 273 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 C14orf144Q96I85 54 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 SSX3Q99909 188 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 ZDHHC8Q9ULC8 765 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 ESPL1Q14674 2120 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 ST8SIA5O15466 376 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 TRAF3IP2O43734 574 aaPredicted RBP10.74□□□□□ -0.69
HDAC7-230ENST00000552960 SSSCA1O60232 199 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 TRGC2P03986 189 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 FABP4P15090 132 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 TMEM187Q14656 261 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 ZNF124Q15973 351 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 PIGYQ3MUY2 71 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 SLC25A24Q6NUK1 477 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 STX12Q86Y82 276 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 CYB561D1Q8N8Q1 229 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 Q8WTZ3 238 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 POM121Q96HA1 1249 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 GINS3Q9BRX5 216 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 RARRES3Q9UL19 164 aa10.74□□□□□ -0.69
HDAC7-230ENST00000552960 DHRS3O75911 302 aa10.73□□□□□ -0.69
HDAC7-230ENST00000552960 HOXA5P20719 270 aa10.73□□□□□ -0.69
HDAC7-230ENST00000552960 SSTP61278 116 aa10.73□□□□□ -0.69
HDAC7-230ENST00000552960 HERV-K104P61576 105 aa10.73□□□□□ -0.69
HDAC7-230ENST00000552960 RND3P61587 244 aa10.73□□□□□ -0.69
HDAC7-230ENST00000552960 RAB1AP62820 205 aa10.73□□□□□ -0.69
HDAC7-230ENST00000552960 NKX6-1P78426 367 aaPredicted RBP10.73□□□□□ -0.69
HDAC7-230ENST00000552960 EWSR1Q01844 656 aaKnown RBP eCLIP10.73□□□□□ -0.694e-6■■■■□ 22.2
HDAC7-230ENST00000552960 SSX2Q16385 188 aa10.73□□□□□ -0.69
HDAC7-230ENST00000552960 ZNF429Q86V71 674 aa10.73□□□□□ -0.69
HDAC7-230ENST00000552960 TMEM123Q8N131 208 aa10.73□□□□□ -0.69
HDAC7-230ENST00000552960 SLC35G3Q8N808 338 aa10.73□□□□□ -0.69
HDAC7-230ENST00000552960 PNRC2Q9NPJ4 139 aaKnown RBP10.73□□□□□ -0.69
HDAC7-230ENST00000552960 IFITM10A6NMD0 228 aa10.73□□□□□ -0.69
HDAC7-230ENST00000552960 GEMIN2O14893 280 aaKnown RBP10.73□□□□□ -0.69
HDAC7-230ENST00000552960 TLX3O43711 291 aaPredicted RBP10.73□□□□□ -0.69
HDAC7-230ENST00000552960 SP9P0CG40 484 aa10.73□□□□□ -0.69
HDAC7-230ENST00000552960 CDX1P47902 265 aaPredicted RBP10.73□□□□□ -0.69
HDAC7-230ENST00000552960 CSNK1A1P48729 337 aa10.73□□□□□ -0.69
HDAC7-230ENST00000552960 GRB2P62993 217 aaKnown RBP10.73□□□□□ -0.69
HDAC7-230ENST00000552960 ZNF610Q8N9Z0 462 aa10.73□□□□□ -0.69
HDAC7-230ENST00000552960 STRAPQ9Y3F4 350 aaKnown RBP10.73□□□□□ -0.69
HDAC7-230ENST00000552960 A0A087X0M5 115 aa10.73□□□□□ -0.69
HDAC7-230ENST00000552960 A0A1B0GX30 115 aa10.73□□□□□ -0.69
HDAC7-230ENST00000552960 NKX2-6A6NCS4 301 aa10.73□□□□□ -0.69
HDAC7-230ENST00000552960 M0R135 149 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms