RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 ZNF665Q9H7R5 613 aa9.48□□□□□ -0.89
TMEM116-218ENST00000552839 MTCH1Q9NZJ7 389 aa9.48□□□□□ -0.89
TMEM116-218ENST00000552839 MIOXQ9UGB7 285 aa9.48□□□□□ -0.89
TMEM116-218ENST00000552839 TRRAPQ9Y4A5 3859 aa9.48□□□□□ -0.89
TMEM116-218ENST00000552839 A0A0G2JK05 382 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 SMIM31A0A1B0GVY4 71 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 CEACAM18A8MTB9 384 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 AIPO00170 330 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 SH2D1BO14796 132 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 NDUFB3O43676 98 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 NOS1APO75052 506 aaPredicted RBP9.47□□□□□ -0.89
TMEM116-218ENST00000552839 HAND1O96004 215 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 KNG1P01042 644 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 IL1AP01583 271 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 CLEC2LP0C7M8 214 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 HKR1P10072 659 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 GABRR1P24046 479 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 TGFBR1P36897 503 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 NPBWR2P48146 333 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 CLDN12P56749 244 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 IL13RA1P78552 427 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 FOXL1Q12952 345 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 BLMHQ13867 455 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 FAM189A2Q15884 450 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 ZNF404Q494X3 552 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 LRRC10Q5BKY1 277 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 SPIN3Q5JUX0 258 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 C1orf100Q5SVJ3 147 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 TEX36Q5VZQ5 186 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 TREML4Q6UXN2 200 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 C1QL2Q7Z5L3 287 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 TEX29Q8N6K0 151 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 OR4D6Q8NGJ1 314 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 KCNG3Q8TAE7 436 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 AP3S1Q92572 193 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 FAM3DQ96BQ1 224 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 ISOC1Q96CN7 298 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 NEIL1Q96FI4 390 aaPredicted RBP9.47□□□□□ -0.89
TMEM116-218ENST00000552839 MED30Q96HR3 178 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 TMEM246Q9BRR3 403 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 URM1Q9BTM9 101 aaKnown RBP9.47□□□□□ -0.89
TMEM116-218ENST00000552839 SELENOIQ9C0D9 397 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 DCSTAMPQ9H295 470 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 NDUFA13Q9P0J0 144 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 CLN8Q9UBY8 286 aa9.47□□□□□ -0.89
TMEM116-218ENST00000552839 RSL24D1Q9UHA3 163 aaKnown RBP9.47□□□□□ -0.89
TMEM116-218ENST00000552839 RFPL4AA6NLU0 287 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 IFITM5A6NNB3 132 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 RFPL4AL1F8VTS6 287 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 H3BUI4 141 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 SIRPB1O00241 398 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 OR7C1O76099 320 aaPredicted RBP9.46□□□□□ -0.9
TMEM116-218ENST00000552839 LHBP01229 141 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 ACAA1P09110 424 aaPredicted RBP9.46□□□□□ -0.9
TMEM116-218ENST00000552839 MGMTP16455 207 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 NDUFB7P17568 137 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 RBMXP38159 391 aaKnown RBP9.46□□□□□ -0.9
TMEM116-218ENST00000552839 PITPNBP48739 271 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 CAV3P56539 151 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 FGF12P61328 243 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 GNB2P62879 340 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 HOXA4Q00056 320 aaPredicted RBP9.46□□□□□ -0.9
TMEM116-218ENST00000552839 IL13RA2Q14627 380 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 MIDNQ504T8 468 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 ATAD3CQ5T2N8 411 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 SLC16A12Q6ZSM3 486 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 OR2W3Q7Z3T1 314 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 RNF144BQ7Z419 303 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 LINC00596Q86U02 117 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 LRRC28Q86X40 367 aaPredicted RBP9.46□□□□□ -0.9
TMEM116-218ENST00000552839 OR51D1Q8NGF3 324 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 OR51T1Q8NGJ9 327 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 NDNFQ8TB73 568 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 ST8SIA4Q92187 359 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 SEH1LQ96EE3 360 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 CCL13Q99616 98 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 MRI1Q9BV20 369 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 BANF2Q9H503 90 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 LIN7BQ9HAP6 207 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 HMG20AQ9NP66 347 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 IL36GQ9NZH8 169 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 OR5V1Q9UGF6 321 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 ST3GAL6Q9Y274 331 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 TGP01266 2768 aa9.46□□□□□ -0.9
TMEM116-218ENST00000552839 IGKV1-12A0A0C4DH73 117 aa9.45□□□□□ -0.9
TMEM116-218ENST00000552839 SHISA3A0PJX4 238 aa9.45□□□□□ -0.9
TMEM116-218ENST00000552839 DEGS1O15121 323 aa9.45□□□□□ -0.9
TMEM116-218ENST00000552839 IGKV1D-12P01611 117 aa9.45□□□□□ -0.9
TMEM116-218ENST00000552839 SFTPBP07988 381 aa9.45□□□□□ -0.9
TMEM116-218ENST00000552839 CHRM2P08172 466 aa9.45□□□□□ -0.9
TMEM116-218ENST00000552839 SLC2A2P11168 524 aaPredicted RBP9.45□□□□□ -0.9
TMEM116-218ENST00000552839 PSG2P11465 335 aa9.45□□□□□ -0.9
TMEM116-218ENST00000552839 CPT2P23786 658 aa9.45□□□□□ -0.9
TMEM116-218ENST00000552839 DUSP1P28562 367 aa9.45□□□□□ -0.9
TMEM116-218ENST00000552839 PRDX2P32119 198 aa9.45□□□□□ -0.9
TMEM116-218ENST00000552839 CEBPDP49716 269 aaPredicted RBP9.45□□□□□ -0.9
TMEM116-218ENST00000552839 RORCP51449 518 aa9.45□□□□□ -0.9
TMEM116-218ENST00000552839 RBM11P57052 281 aaKnown RBP9.45□□□□□ -0.9
TMEM116-218ENST00000552839 MRPS15P82914 257 aaKnown RBP9.45□□□□□ -0.9
TMEM116-218ENST00000552839 CTF1Q16619 201 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms