RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 ATP6V1E1P36543 226 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 OR1E2P47887 323 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 SLC9A3P48764 834 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 BMXP51813 675 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 CAV3P56539 151 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 MTPNP58546 118 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 FXYD6P3P58550 94 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 TAS2R41P59536 307 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 BLCAPP62952 87 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 ZNF92Q03936 586 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 ST3GAL3Q11203 375 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 TRAP1Q12931 704 aaKnown RBP2.81□□□□□ -1.96
LIMA1-206ENST00000550611 ECH1Q13011 328 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 DYNC1I2Q13409 638 aaKnown RBP2.81□□□□□ -1.96
LIMA1-206ENST00000550611 MEP1BQ16820 701 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 CYP51A1Q16850 503 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 DGUOKQ16854 277 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 PNLIPRP3Q17RR3 467 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 MICBQ29980 383 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 SNAI3Q3KNW1 292 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 ZBED5Q49AG3 693 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 AGKQ53H12 422 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 LDLRAD2Q5SZI1 272 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 THOC7Q6I9Y2 204 aaKnown RBP2.81□□□□□ -1.96
LIMA1-206ENST00000550611 CORO6Q6QEF8 472 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 TBPL2Q6SJ96 375 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 WDR82Q6UXN9 313 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 CFAP77Q6ZQR2 320 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 MBOAT2Q6ZWT7 520 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 SLC36A1Q7Z2H8 476 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 C16orf82Q7Z2V1 217 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 CCDC190Q86UF4 302 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 LINC00346Q8IVM7 164 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 NRMQ8IXM6 262 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 MICU2Q8IYU8 434 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 SLC7A5P1Q8MH63 180 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 OR6V1Q8N148 313 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 DYNAPQ8N1N2 210 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 FAM216BQ8N7L0 139 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 SLC26A10Q8NG04 563 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 OR1M1Q8NGA1 313 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 OR51G2Q8NGK0 314 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 OR9Q1Q8NGQ5 310 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 OR13C2Q8NGS9 318 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 OR10A6Q8NH74 314 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 ANGPTL6Q8NI99 470 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 TMEM163Q8TC26 289 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 SLC26A7Q8TE54 656 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 SPRYD4Q8WW59 207 aaPredicted RBP2.81□□□□□ -1.96
LIMA1-206ENST00000550611 ORAI1Q96D31 301 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 DUS3LQ96G46 650 aaKnown RBP2.81□□□□□ -1.96
LIMA1-206ENST00000550611 TSSK2Q96PF2 358 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 GAFA1Q96PS6 74 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 EBF4Q9BQW3 602 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 ADAT1Q9BUB4 502 aaKnown RBP2.81□□□□□ -1.96
LIMA1-206ENST00000550611 TEX12Q9BXU0 123 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 SYT4Q9H2B2 425 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 CENPHQ9H3R5 247 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.81□□□□□ -1.96
LIMA1-206ENST00000550611 OR14J1Q9UGF5 321 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 CYB5R1Q9UHQ9 305 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 B9D1Q9UPM9 204 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 AURKCQ9UQB9 309 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 TCF19Q9Y242 345 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 SIGLEC7Q9Y286 467 aa2.81□□□□□ -1.96
LIMA1-206ENST00000550611 HSPG2P98160 4391 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 PKHD1P08F94 4074 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 TMEM120BA0PK00 339 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 E9PQ18 207 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 F5H5K5 113 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 M0R135 149 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 BHLHE40O14503 412 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 NDUFAB1O14561 156 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 CDIPTO14735 213 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 HSPA12AO43301 675 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 SYNGR1O43759 233 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 ANGPTL7O43827 346 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 NDUFB2O95178 105 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 TFF1P04155 84 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 CRABP1P29762 137 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 KDELR2P33947 212 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 DDOSTP39656 456 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 NAA10P41227 235 aaPredicted RBP2.8□□□□□ -1.96
LIMA1-206ENST00000550611 OMPP47874 163 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 RAB13P51153 203 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 DYNLT3P51808 116 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 STX1BP61266 288 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 SELENOWP63302 87 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 CSNK2BP67870 215 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 SLC35A2P78381 396 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 SPIBQ01892 262 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 MZT1Q08AG7 82 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 KRR1Q13601 381 aaKnown RBP2.8□□□□□ -1.96
LIMA1-206ENST00000550611 TRAM2Q15035 370 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 RFX4Q33E94 735 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 KLHL12Q53G59 568 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 CYBRD1Q53TN4 286 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 LRRC10Q5BKY1 277 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 GLYATL3Q5SZD4 288 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 LCE3AQ5TA76 89 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms