RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 WDR25Q64LD2 544 aaPredicted RBP17.52■□□□□ 0.4
CACNB3-210ENST00000548874 ZNRF1Q8ND25 227 aa17.52■□□□□ 0.4
CACNB3-210ENST00000548874 POM121Q96HA1 1249 aa17.52■□□□□ 0.4
CACNB3-210ENST00000548874 C18orf12Q96KH6 178 aa17.52■□□□□ 0.4
CACNB3-210ENST00000548874 TM2D1Q9BX74 207 aa17.52■□□□□ 0.4
CACNB3-210ENST00000548874 TMEM59Q9BXS4 323 aa17.52■□□□□ 0.4
CACNB3-210ENST00000548874 SELENOIQ9C0D9 397 aa17.52■□□□□ 0.4
CACNB3-210ENST00000548874 ABCA2Q9BZC7 2435 aa17.52■□□□□ 0.4
CACNB3-210ENST00000548874 FLNAP21333 2647 aaKnown RBP17.51■□□□□ 0.39
CACNB3-210ENST00000548874 YLPM1P49750 1951 aaKnown RBP17.51■□□□□ 0.39
CACNB3-210ENST00000548874 TMEM272A0A1B0GTI8 110 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 TMEM82A0PJX8 343 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 FAM90A10PA6NDY2 464 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 FAM90A18PA6NE21 464 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 FAM90A16PA6NEW6 464 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 FAM90A20PA6NIJ5 464 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 FAM90A8PA6NJQ4 464 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 FAM90A7PA6NKC0 464 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 FAM90A22PA8MWA6 464 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 KIAA1324LA8MWY0 1029 aaPredicted RBP17.51■□□□□ 0.39
CACNB3-210ENST00000548874 FAM90A12PA8MX19 464 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 FAM90A5PA8MXJ8 464 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 FAM90A23PA8MXZ1 464 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 GEMIN2O14893 280 aaKnown RBP17.51■□□□□ 0.39
CACNB3-210ENST00000548874 NDUFB3O43676 98 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 NOL3O60936 208 aaKnown RBP17.51■□□□□ 0.39
CACNB3-210ENST00000548874 FAM90A15PP0C7V4 464 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 FAM90A13PP0C7W8 464 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 FAM90A14PP0C7W9 464 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 FAM90A24PP0C7X0 464 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 IGHV4-31P0DP07 118 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 IKZF1Q13422 519 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 TAF9Q16594 264 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 MPV17LQ2QL34 196 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 CHST4Q8NCG5 386 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 SSBP3Q9BWW4 388 aaPredicted RBP17.51■□□□□ 0.39
CACNB3-210ENST00000548874 BARHL1Q9BZE3 327 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 FAM234AQ9H0X4 552 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 ZNF581Q9P0T4 197 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 CLN8Q9UBY8 286 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 OR5V1Q9UGF6 321 aa17.51■□□□□ 0.39
CACNB3-210ENST00000548874 MED13LQ71F56 2210 aa17.5■□□□□ 0.39
CACNB3-210ENST00000548874 SMIM31A0A1B0GVY4 71 aa17.5■□□□□ 0.39
CACNB3-210ENST00000548874 K7N7A8 449 aa17.5■□□□□ 0.39
CACNB3-210ENST00000548874 ZNF701M0R085 212 aaPredicted RBP17.5■□□□□ 0.39
CACNB3-210ENST00000548874 SIRPB1O00241 398 aa17.5■□□□□ 0.39
CACNB3-210ENST00000548874 SLC33A1O00400 549 aaPredicted RBP17.5■□□□□ 0.39
CACNB3-210ENST00000548874 DEGS1O15121 323 aa17.5■□□□□ 0.39
CACNB3-210ENST00000548874 PSPNO60542 156 aa17.5■□□□□ 0.39
CACNB3-210ENST00000548874 SNRPBP14678 240 aaKnown RBP17.5■□□□□ 0.39
CACNB3-210ENST00000548874 ZNF44P15621 663 aa17.5■□□□□ 0.39
CACNB3-210ENST00000548874 ZFP36P26651 326 aaKnown RBP17.5■□□□□ 0.39
CACNB3-210ENST00000548874 SCAND1P57086 179 aa17.5■□□□□ 0.39
CACNB3-210ENST00000548874 GNB2P62879 340 aa17.5■□□□□ 0.39
CACNB3-210ENST00000548874 PLA2G7Q13093 441 aa17.5■□□□□ 0.39
CACNB3-210ENST00000548874 PDCD1Q15116 288 aa17.5■□□□□ 0.39
CACNB3-210ENST00000548874 LRRC10Q5BKY1 277 aa17.5■□□□□ 0.39
CACNB3-210ENST00000548874 IDNKQ5T6J7 187 aa17.5■□□□□ 0.39
CACNB3-210ENST00000548874 C17orf107Q6ZR85 190 aa17.5■□□□□ 0.39
CACNB3-210ENST00000548874 FGFRL1Q8N441 504 aa17.5■□□□□ 0.39
CACNB3-210ENST00000548874 PTX4Q96A99 478 aa17.5■□□□□ 0.39
CACNB3-210ENST00000548874 SNX22Q96L94 193 aa17.5■□□□□ 0.39
CACNB3-210ENST00000548874 MRI1Q9BV20 369 aa17.5■□□□□ 0.39
CACNB3-210ENST00000548874 SHARPINQ9H0F6 387 aa17.5■□□□□ 0.39
CACNB3-210ENST00000548874 LPAR5Q9H1C0 372 aa17.5■□□□□ 0.39
CACNB3-210ENST00000548874 SLC25A10Q9UBX3 287 aaPredicted RBP17.5■□□□□ 0.39
CACNB3-210ENST00000548874 POLR3KQ9Y2Y1 108 aaPredicted RBP17.5■□□□□ 0.39
CACNB3-210ENST00000548874 MALRD1Q5VYJ5 2156 aa17.49■□□□□ 0.39
CACNB3-210ENST00000548874 TRAV24A0A0B4J272 114 aa17.49■□□□□ 0.39
CACNB3-210ENST00000548874 B4DSR2 109 aa17.49■□□□□ 0.39
CACNB3-210ENST00000548874 PHF1O43189 567 aaPredicted RBP17.49■□□□□ 0.39
CACNB3-210ENST00000548874 FOXH1O75593 365 aa17.49■□□□□ 0.39
CACNB3-210ENST00000548874 TK1P04183 234 aa17.49■□□□□ 0.39
CACNB3-210ENST00000548874 RAB6AP20340 208 aa17.49■□□□□ 0.39
CACNB3-210ENST00000548874 GZMKP49863 264 aa17.49■□□□□ 0.39
CACNB3-210ENST00000548874 C11orf91Q3C1V1 193 aa17.49■□□□□ 0.39
CACNB3-210ENST00000548874 ASCC1Q8N9N2 400 aaKnown RBP17.49■□□□□ 0.39
CACNB3-210ENST00000548874 TMEM185AQ8NFB2 350 aa17.49■□□□□ 0.39
CACNB3-210ENST00000548874 LGALS14Q8TCE9 139 aa17.49■□□□□ 0.39
CACNB3-210ENST00000548874 RCC2Q9P258 522 aaKnown RBP17.49■□□□□ 0.39
CACNB3-210ENST00000548874 RSL24D1Q9UHA3 163 aaKnown RBP17.49■□□□□ 0.39
CACNB3-210ENST00000548874 RAB22AQ9UL26 194 aa17.49■□□□□ 0.39
CACNB3-210ENST00000548874 MAST4O15021 2626 aa17.49■□□□□ 0.39
CACNB3-210ENST00000548874 DPPA5A6NC42 116 aa17.48■□□□□ 0.39
CACNB3-210ENST00000548874 GPR37O15354 613 aa17.48■□□□□ 0.39
CACNB3-210ENST00000548874 OR7C1O76099 320 aaPredicted RBP17.48■□□□□ 0.39
CACNB3-210ENST00000548874 PAHP00439 452 aa17.48■□□□□ 0.39
CACNB3-210ENST00000548874 INHBBP09529 407 aa17.48■□□□□ 0.39
CACNB3-210ENST00000548874 CD99P14209 185 aa17.48■□□□□ 0.39
CACNB3-210ENST00000548874 FOSL1P15407 271 aa17.48■□□□□ 0.39
CACNB3-210ENST00000548874 OR3A1P47881 315 aa17.48■□□□□ 0.39
CACNB3-210ENST00000548874 EFNB2P52799 333 aa17.48■□□□□ 0.39
CACNB3-210ENST00000548874 KRTAP1-1Q07627 177 aa17.48■□□□□ 0.39
CACNB3-210ENST00000548874 SCN1BQ07699 218 aa17.48■□□□□ 0.39
CACNB3-210ENST00000548874 SIGIRRQ6IA17 410 aa17.48■□□□□ 0.39
CACNB3-210ENST00000548874 OR8H2Q8N162 312 aa17.48■□□□□ 0.39
CACNB3-210ENST00000548874 FAM89BQ8N5H3 189 aa17.48■□□□□ 0.39
CACNB3-210ENST00000548874 LINC01356Q8N9X3 169 aa17.48■□□□□ 0.39
CACNB3-210ENST00000548874 OR4S1Q8NGB4 309 aa17.48■□□□□ 0.39
CACNB3-210ENST00000548874 KCTD12Q96CX2 325 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms