RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 ZNF146Q15072 292 aa21.43■■□□□ 1.02
SRSF9-202ENST00000546942 SPIN3Q5JUX0 258 aa21.43■■□□□ 1.02
SRSF9-202ENST00000546942 TCF23Q7RTU1 214 aa21.43■■□□□ 1.02
SRSF9-202ENST00000546942 TRAPPC6BQ86SZ2 158 aa21.43■■□□□ 1.02
SRSF9-202ENST00000546942 PPP1R35Q8TAP8 253 aa21.43■■□□□ 1.02
SRSF9-202ENST00000546942 HAVCR2Q8TDQ0 301 aa21.43■■□□□ 1.02
SRSF9-202ENST00000546942 EXOSC4Q9NPD3 245 aaKnown RBP21.43■■□□□ 1.02
SRSF9-202ENST00000546942 DHDHQ9UQ10 334 aa21.43■■□□□ 1.02
SRSF9-202ENST00000546942 WBP4O75554 376 aaKnown RBP21.42■■□□□ 1.02
SRSF9-202ENST00000546942 MT-ND2P03891 347 aa21.42■■□□□ 1.02
SRSF9-202ENST00000546942 CCDC159P0C7I6 412 aa21.42■■□□□ 1.02
SRSF9-202ENST00000546942 OR3A1P47881 315 aa21.42■■□□□ 1.02
SRSF9-202ENST00000546942 GTF2A1P52655 376 aaPredicted RBP21.42■■□□□ 1.02
SRSF9-202ENST00000546942 MRPL28Q13084 256 aaKnown RBP21.42■■□□□ 1.02
SRSF9-202ENST00000546942 SERPINA12Q8IW75 414 aa21.42■■□□□ 1.02
SRSF9-202ENST00000546942 DYNAPQ8N1N2 210 aa21.42■■□□□ 1.02
SRSF9-202ENST00000546942 OR5D14Q8NGL3 314 aa21.42■■□□□ 1.02
SRSF9-202ENST00000546942 JAM3Q9BX67 310 aa21.42■■□□□ 1.02
SRSF9-202ENST00000546942 SEBOXQ9HB31 216 aaPredicted RBP21.42■■□□□ 1.02
SRSF9-202ENST00000546942 SIGLEC9Q9Y336 463 aa21.42■■□□□ 1.02
SRSF9-202ENST00000546942 H0YJX3 145 aa21.41■■□□□ 1.02
SRSF9-202ENST00000546942 M0QZ24 198 aa21.41■■□□□ 1.02
SRSF9-202ENST00000546942 MGST3O14880 152 aa21.41■■□□□ 1.02
SRSF9-202ENST00000546942 CLIC3O95833 236 aa21.41■■□□□ 1.02
SRSF9-202ENST00000546942 OR2H2O95918 312 aa21.41■■□□□ 1.02
SRSF9-202ENST00000546942 RPSAP08865 295 aaKnown RBP21.41■■□□□ 1.02
SRSF9-202ENST00000546942 LIMS3P0CW19 117 aa21.41■■□□□ 1.02
SRSF9-202ENST00000546942 LIMS4P0CW20 117 aa21.41■■□□□ 1.02
SRSF9-202ENST00000546942 TMEM225BP0DP42 221 aa21.41■■□□□ 1.02
SRSF9-202ENST00000546942 GABRA5P31644 462 aa21.41■■□□□ 1.02
SRSF9-202ENST00000546942 CAPGP40121 348 aa21.41■■□□□ 1.02
SRSF9-202ENST00000546942 RAB13P51153 203 aa21.41■■□□□ 1.02
SRSF9-202ENST00000546942 FAM189A2Q15884 450 aa21.41■■□□□ 1.02
SRSF9-202ENST00000546942 LINC00312Q9Y6C7 94 aa21.41■■□□□ 1.02
SRSF9-202ENST00000546942 KIAA2026Q5HYC2 2103 aa21.41■■□□□ 1.02
SRSF9-202ENST00000546942 TIMM23O14925 209 aa21.4■■□□□ 1.02
SRSF9-202ENST00000546942 KDM4BO94953 1096 aa21.4■■□□□ 1.02
SRSF9-202ENST00000546942 RBP4P02753 201 aa21.4■■□□□ 1.02
SRSF9-202ENST00000546942 KISS1Q15726 138 aa21.4■■□□□ 1.02
SRSF9-202ENST00000546942 SSX2Q16385 188 aa21.4■■□□□ 1.02
SRSF9-202ENST00000546942 AANATQ16613 207 aa21.4■■□□□ 1.02
SRSF9-202ENST00000546942 ASPHD2Q6ICH7 369 aa21.4■■□□□ 1.02
SRSF9-202ENST00000546942 CRIP3Q6Q6R5 217 aa21.4■■□□□ 1.02
SRSF9-202ENST00000546942 CNIH3Q8TBE1 160 aa21.4■■□□□ 1.02
SRSF9-202ENST00000546942 FGF20Q9NP95 211 aaPredicted RBP21.4■■□□□ 1.02
SRSF9-202ENST00000546942 ING3Q9NXR8 418 aa21.4■■□□□ 1.02
SRSF9-202ENST00000546942 PCDHGB5Q9Y5G0 923 aa21.4■■□□□ 1.02
SRSF9-202ENST00000546942 FAM90A8PA6NJQ4 464 aa21.39■■□□□ 1.01
SRSF9-202ENST00000546942 ODF3BA8MYP8 253 aa21.39■■□□□ 1.01
SRSF9-202ENST00000546942 SULT1B1O43704 296 aa21.39■■□□□ 1.01
SRSF9-202ENST00000546942 ZNF44P15621 663 aa21.39■■□□□ 1.01
SRSF9-202ENST00000546942 DCKP27707 260 aa21.39■■□□□ 1.01
SRSF9-202ENST00000546942 SOX2P48431 317 aa21.39■■□□□ 1.01
SRSF9-202ENST00000546942 ETV1P50549 477 aa21.39■■□□□ 1.01
SRSF9-202ENST00000546942 SATL1Q86VE3 508 aa21.39■■□□□ 1.01
SRSF9-202ENST00000546942 C8orf59Q8N0T1 100 aaPredicted RBP21.39■■□□□ 1.01
SRSF9-202ENST00000546942 PIFOQ8TCI5 191 aa21.39■■□□□ 1.01
SRSF9-202ENST00000546942 NKX3-1Q99801 234 aaPredicted RBP21.39■■□□□ 1.01
SRSF9-202ENST00000546942 NKX1-2Q9UD57 310 aaPredicted RBP21.39■■□□□ 1.01
SRSF9-202ENST00000546942 TBL2Q9Y4P3 447 aaKnown RBP21.39■■□□□ 1.01
SRSF9-202ENST00000546942 P2RX3P56373 397 aa21.38■■□□□ 1.01
SRSF9-202ENST00000546942 AESQ08117 197 aa21.38■■□□□ 1.01
SRSF9-202ENST00000546942 LDLRAD2Q5SZI1 272 aa21.38■■□□□ 1.01
SRSF9-202ENST00000546942 ZNF626Q68DY1 528 aa21.38■■□□□ 1.01
SRSF9-202ENST00000546942 SAXO1Q8IYX7 474 aa21.38■■□□□ 1.01
SRSF9-202ENST00000546942 PARP16Q8N5Y8 322 aa21.38■■□□□ 1.01
SRSF9-202ENST00000546942 OR11H6Q8NGC7 330 aa21.38■■□□□ 1.01
SRSF9-202ENST00000546942 OR4C13Q8NGP0 309 aa21.38■■□□□ 1.01
SRSF9-202ENST00000546942 RAB18Q9NP72 206 aa21.38■■□□□ 1.01
SRSF9-202ENST00000546942 ABCB10Q9NRK6 738 aa21.38■■□□□ 1.01
SRSF9-202ENST00000546942 SESN1Q9Y6P5 492 aa21.38■■□□□ 1.01
SRSF9-202ENST00000546942 WNK1Q9H4A3 2382 aa21.38■■□□□ 1.01
SRSF9-202ENST00000546942 H0YHG0 523 aa21.37■■□□□ 1.01
SRSF9-202ENST00000546942 CHST1O43916 411 aa21.37■■□□□ 1.01
SRSF9-202ENST00000546942 XAF1Q6GPH4 301 aa21.37■■□□□ 1.01
SRSF9-202ENST00000546942 FOXRED1Q96CU9 486 aaPredicted RBP21.37■■□□□ 1.01
SRSF9-202ENST00000546942 MALSU1Q96EH3 234 aa21.37■■□□□ 1.01
SRSF9-202ENST00000546942 NR1H4Q96RI1 486 aaPredicted RBP21.37■■□□□ 1.01
SRSF9-202ENST00000546942 GPER1Q99527 375 aa21.37■■□□□ 1.01
SRSF9-202ENST00000546942 VCX3BQ9H321 246 aa21.37■■□□□ 1.01
SRSF9-202ENST00000546942 FBLN5Q9UBX5 448 aa21.37■■□□□ 1.01
SRSF9-202ENST00000546942 HILPDAQ9Y5L2 63 aa21.37■■□□□ 1.01
SRSF9-202ENST00000546942 MMP23AO75900 390 aa21.36■■□□□ 1.01
SRSF9-202ENST00000546942 RAB3AP20336 220 aa21.36■■□□□ 1.01
SRSF9-202ENST00000546942 ERP29P30040 261 aaKnown RBP21.36■■□□□ 1.01
SRSF9-202ENST00000546942 GLIPR1P48060 266 aa21.36■■□□□ 1.01
SRSF9-202ENST00000546942 ZP1P60852 638 aa21.36■■□□□ 1.01
SRSF9-202ENST00000546942 OR2G6Q5TZ20 316 aa21.36■■□□□ 1.01
SRSF9-202ENST00000546942 TMPRSS11AQ6ZMR5 421 aa21.36■■□□□ 1.01
SRSF9-202ENST00000546942 NDNFQ8TB73 568 aa21.36■■□□□ 1.01
SRSF9-202ENST00000546942 RGP1Q92546 391 aaPredicted RBP21.36■■□□□ 1.01
SRSF9-202ENST00000546942 TFAP2CQ92754 450 aa21.36■■□□□ 1.01
SRSF9-202ENST00000546942 TMEM133Q9H2Q1 129 aa21.36■■□□□ 1.01
SRSF9-202ENST00000546942 TAS2R4Q9NYW5 299 aa21.36■■□□□ 1.01
SRSF9-202ENST00000546942 UBE2J1Q9Y385 318 aaPredicted RBP21.36■■□□□ 1.01
SRSF9-202ENST00000546942 TRGV10A0A0A0MS01 117 aa21.35■■□□□ 1.01
SRSF9-202ENST00000546942 IGHV2-26A0A0B4J1V2 119 aa21.35■■□□□ 1.01
SRSF9-202ENST00000546942 A0A0G2JK05 382 aa21.35■■□□□ 1.01
SRSF9-202ENST00000546942 DEGS1O15121 323 aa21.35■■□□□ 1.01
SRSF9-202ENST00000546942 MAGEB3O15480 346 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms