RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 SIRPB1O00241 398 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 PSPNO60542 156 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 PEX14O75381 377 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 KDM4BO94953 1096 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 IGHA1P01876 353 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 ALDOBP05062 364 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 TMEM225BP0DP42 221 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 DBTP11182 482 aaKnown RBP7.57□□□□□ -1.2
YBX3-218ENST00000546298 ZNF44P15621 663 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 GABRB1P18505 474 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 LMO1P25800 156 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 HTR1DP28221 377 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 ARHGDIBP52566 201 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 SNU13P55769 128 aaKnown RBP7.57□□□□□ -1.2
YBX3-218ENST00000546298 RTN4RL2Q86UN3 420 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 SERPINA12Q8IW75 414 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 KLHDC1Q8N7A1 406 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 TPRX1Q8N7U7 411 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 OR5AK2Q8NH90 309 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 FAM110DQ8TAY7 271 aaPredicted RBP7.57□□□□□ -1.2
YBX3-218ENST00000546298 ZNF596Q8TC21 504 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 CREB3L1Q96BA8 519 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 CLEC7AQ9BXN2 247 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 PRSS22Q9GZN4 317 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 CHST6Q9GZX3 395 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 TMEM133Q9H2Q1 129 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 GAL3ST2Q9H3Q3 398 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 S100A14Q9HCY8 104 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 TAS2R3Q9NYW6 316 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 DHDHQ9UQ10 334 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 TENM1Q9UKZ4 2725 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 IGHV2-26A0A0B4J1V2 119 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 IGKV1-12A0A0C4DH73 117 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 LOC100130705A0A1B0GUX0 176 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 MEX3AA1L020 520 aaKnown RBP7.56□□□□□ -1.2
YBX3-218ENST00000546298 A6NDX4 124 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 F2RL2O00254 374 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 EBAG9O00559 213 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 DEGS1O15121 323 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 MAGEB3O15480 346 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 CHST1O43916 411 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 ZFPL1O95159 310 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 OR2H2O95918 312 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 IGKV1D-12P01611 117 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 CSN2P05814 226 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 HCKP08631 526 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 VSIG10L2P0DP72 767 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 CALCBP10092 127 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 PAX6P26367 422 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 BRS3P32247 399 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 OR3A1P47881 315 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 MTNR1BP49286 362 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 RAB13P51153 203 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 EMX1Q04741 257 aaPredicted RBP7.56□□□□□ -1.2
YBX3-218ENST00000546298 SLC34A1Q06495 639 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 SCN1BQ07699 218 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 PLA1AQ53H76 456 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 ARSJQ5FYB0 599 aaPredicted RBP7.56□□□□□ -1.2
YBX3-218ENST00000546298 HEPN1Q6WQI6 88 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 TCF23Q7RTU1 214 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 DYNAPQ8N1N2 210 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 Q8N2B8 174 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 ABHD12Q8N2K0 398 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 PQLC1Q8N2U9 271 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 PARP16Q8N5Y8 322 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 ZNF555Q8NEP9 628 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 OR51A4Q8NGJ6 313 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 OR5D18Q8NGL1 313 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 OR10AC1Q8NH08 325 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 TSEN15Q8WW01 171 aaKnown RBP7.56□□□□□ -1.2
YBX3-218ENST00000546298 CAPSLQ8WWF8 208 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 CFHR4Q92496 578 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 CORO2AQ92828 525 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 RFT1Q96AA3 541 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 AMBNQ9NP70 447 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 MRPS18AQ9NVS2 196 aaKnown RBP7.56□□□□□ -1.2
YBX3-218ENST00000546298 ERVK13-1Q9NX77 482 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 PLA2G2EQ9NZK7 142 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 DPM3Q9P2X0 92 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 IL36RNQ9UBH0 155 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 AASSQ9UDR5 926 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 MYRFQ9Y2G1 1151 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 HILPDAQ9Y5L2 63 aa7.56□□□□□ -1.2
YBX3-218ENST00000546298 IRGMA1A4Y4 181 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 LEUTXA8MZ59 168 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 TOR1AO14656 332 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 SULT1B1O43704 296 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 TSPAN15O95858 294 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 CD2P06729 351 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 RAB3AP20336 220 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 CEACAM3P40198 252 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 PRRX1P54821 245 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 BDH1Q02338 343 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 KISS1Q15726 138 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 CCDC58Q4VC31 144 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 ZNF691Q5VV52 312 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 LPCAT4Q643R3 524 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 CCBE1Q6UXH8 406 aaPredicted RBP7.55□□□□□ -1.2
YBX3-218ENST00000546298 TMPRSS11AQ6ZMR5 421 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 ZNF565Q8N9K5 539 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms