RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 UCP3P55916 312 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 TAS2R60P59551 318 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 SRPXP78539 464 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 HLA-DRB3P79483 266 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 OR10AD1Q8NGE0 317 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 OR5C1Q8NGR4 320 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 CLDND2Q8NHS1 167 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 FRZBQ92765 325 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 GNPNAT1Q96EK6 184 aaPredicted RBP12.33□□□□□ -0.44
SRP54-202ENST00000546080 F5P12259 2224 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 C3orf85A0A1B0GTC6 90 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 A0A1W2PPC4 97 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 ZNF732B4DXR9 585 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 M0R135 149 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 MSX1P28360 303 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 CLDN17P56750 224 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 TLE4Q04727 773 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 BRICD5Q6PL45 260 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 P4HA3Q7Z4N8 544 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 TMEM252Q8N6L7 170 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 SPSB1Q96BD6 273 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 ZNF799Q96GE5 643 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 PACRGQ96M98 296 aaPredicted RBP12.33□□□□□ -0.44
SRP54-202ENST00000546080 SPIN2AQ99865 258 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 SPIN2BQ9BPZ2 258 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 LYRM2Q9NU23 88 aaPredicted RBP12.33□□□□□ -0.44
SRP54-202ENST00000546080 MMP17Q9ULZ9 603 aa12.33□□□□□ -0.44
SRP54-202ENST00000546080 RANBP2P49792 3224 aaKnown RBP12.32□□□□□ -0.44
SRP54-202ENST00000546080 TGOLN2O43493 480 aa12.32□□□□□ -0.44
SRP54-202ENST00000546080 NR2C1P13056 603 aa12.32□□□□□ -0.44
SRP54-202ENST00000546080 AADACP22760 399 aa12.32□□□□□ -0.44
SRP54-202ENST00000546080 DYNLT3P51808 116 aa12.32□□□□□ -0.44
SRP54-202ENST00000546080 RSPO4Q2I0M5 234 aaPredicted RBP12.32□□□□□ -0.44
SRP54-202ENST00000546080 DEFB133Q30KQ1 61 aa12.32□□□□□ -0.44
SRP54-202ENST00000546080 UNQ6494/PRO21346Q6UXR6 183 aa12.32□□□□□ -0.44
SRP54-202ENST00000546080 Q6ZSR3 168 aa12.32□□□□□ -0.44
SRP54-202ENST00000546080 DPPA2Q7Z7J5 298 aa12.32□□□□□ -0.44
SRP54-202ENST00000546080 CMTM1Q8IZ96 169 aa12.32□□□□□ -0.44
SRP54-202ENST00000546080 ABHD5Q8WTS1 349 aa12.32□□□□□ -0.44
SRP54-202ENST00000546080 TGIF2Q9GZN2 237 aa12.32□□□□□ -0.44
SRP54-202ENST00000546080 GLRX2Q9NS18 164 aa12.32□□□□□ -0.44
SRP54-202ENST00000546080 SMCO3A2RU48 225 aa12.32□□□□□ -0.44
SRP54-202ENST00000546080 ATXN7O15265 892 aaPredicted RBP12.32□□□□□ -0.44
SRP54-202ENST00000546080 CD200P41217 278 aa12.32□□□□□ -0.44
SRP54-202ENST00000546080 RUNX1Q01196 453 aa12.32□□□□□ -0.44
SRP54-202ENST00000546080 ENDOGQ14249 297 aaKnown RBP12.32□□□□□ -0.44
SRP54-202ENST00000546080 C4orf17Q53FE4 359 aa12.32□□□□□ -0.44
SRP54-202ENST00000546080 SP5Q6BEB4 398 aaPredicted RBP12.32□□□□□ -0.44
SRP54-202ENST00000546080 ZNF695Q8IW36 515 aa12.32□□□□□ -0.44
SRP54-202ENST00000546080 ZNF100Q8IYN0 542 aa12.32□□□□□ -0.44
SRP54-202ENST00000546080 LILRB2Q8N423 598 aa12.32□□□□□ -0.44
SRP54-202ENST00000546080 CDCA3Q99618 268 aaPredicted RBP12.32□□□□□ -0.44
SRP54-202ENST00000546080 TMEM106CQ9BVX2 250 aa12.32□□□□□ -0.44
SRP54-202ENST00000546080 MAGT1Q9H0U3 335 aa12.32□□□□□ -0.44
SRP54-202ENST00000546080 METTL7AQ9H8H3 244 aa12.32□□□□□ -0.44
SRP54-202ENST00000546080 TRBV11-1A0A0K0K1C0 115 aa12.31□□□□□ -0.44
SRP54-202ENST00000546080 ARGFXA6NJG6 315 aa12.31□□□□□ -0.44
SRP54-202ENST00000546080 GEMIN2O14893 280 aaKnown RBP12.31□□□□□ -0.44
SRP54-202ENST00000546080 MPPED1O15442 326 aa12.31□□□□□ -0.44
SRP54-202ENST00000546080 CST7O76096 145 aa12.31□□□□□ -0.44
SRP54-202ENST00000546080 PNLIPP16233 465 aa12.31□□□□□ -0.44
SRP54-202ENST00000546080 NDUFB7P17568 137 aa12.31□□□□□ -0.44
SRP54-202ENST00000546080 CNN3Q15417 329 aaKnown RBP12.31□□□□□ -0.44
SRP54-202ENST00000546080 SNAI3Q3KNW1 292 aa12.31□□□□□ -0.44
SRP54-202ENST00000546080 TMEM217Q8N7C4 229 aa12.31□□□□□ -0.44
SRP54-202ENST00000546080 OR5R1Q8NH85 324 aa12.31□□□□□ -0.44
SRP54-202ENST00000546080 MTIF3Q9H2K0 278 aaKnown RBP12.31□□□□□ -0.44
SRP54-202ENST00000546080 UBE2J1Q9Y385 318 aaPredicted RBP12.31□□□□□ -0.44
SRP54-202ENST00000546080 REV3LO60673 3130 aa12.31□□□□□ -0.44
SRP54-202ENST00000546080 RP1P56715 2156 aa12.31□□□□□ -0.44
SRP54-202ENST00000546080 EXPH5Q8NEV8 1989 aa12.31□□□□□ -0.44
SRP54-202ENST00000546080 LOC102723971A0A1B0GUV8 181 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 AQP7P3A6NL99 342 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 PROB1E7EW31 1015 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 SSX2Q16385 188 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 PIGYQ3MUY2 71 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 DPPA3Q6W0C5 159 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 DMRTC2Q8IXT2 367 aaPredicted RBP12.3□□□□□ -0.44
SRP54-202ENST00000546080 NAXEQ8NCW5 288 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 SPTSSAQ969W0 71 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 SSX3Q99909 188 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 TMEM222Q9H0R3 208 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 PLEK2Q9NYT0 353 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 IGKV1-27A0A075B6S5 117 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 CLDN34H7C241 214 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 PPYP01298 95 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 EPHA1P21709 976 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 OTX1P32242 354 aaPredicted RBP12.3□□□□□ -0.44
SRP54-202ENST00000546080 OR1D5P58170 312 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 RAB11AP62491 216 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 BAXQ07812 192 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 RSPO1Q2MKA7 263 aaPredicted RBP12.3□□□□□ -0.44
SRP54-202ENST00000546080 FAM185AQ8N0U4 392 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 OR10G4Q8NGN3 311 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 BORCS8Q96FH0 119 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 ABHD14BQ96IU4 210 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 SNX22Q96L94 193 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 HIST1H2BLQ99880 126 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 CALHM2Q9HA72 323 aa12.3□□□□□ -0.44
SRP54-202ENST00000546080 GNG13Q9P2W3 67 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms