RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 IGHV2-70P01814 119 aa13.42□□□□□ -0.26
PRPF40A-212ENST00000545856 EIF4EP06730 217 aaKnown RBP13.42□□□□□ -0.26
PRPF40A-212ENST00000545856 PSG2P11465 335 aa13.42□□□□□ -0.26
PRPF40A-212ENST00000545856 CHATP28329 748 aa13.42□□□□□ -0.26
PRPF40A-212ENST00000545856 BLVRBP30043 206 aaPredicted RBP13.42□□□□□ -0.26
PRPF40A-212ENST00000545856 EFNB2P52799 333 aa13.42□□□□□ -0.26
PRPF40A-212ENST00000545856 IKZF1Q13422 519 aa13.42□□□□□ -0.26
PRPF40A-212ENST00000545856 TAF9Q16594 264 aa13.42□□□□□ -0.26
PRPF40A-212ENST00000545856 DEFB113Q30KQ7 82 aa13.42□□□□□ -0.26
PRPF40A-212ENST00000545856 PIGYQ3MUY2 71 aa13.42□□□□□ -0.26
PRPF40A-212ENST00000545856 CNIH2Q6PI25 160 aa13.42□□□□□ -0.26
PRPF40A-212ENST00000545856 CLEC2AQ6UVW9 174 aa13.42□□□□□ -0.26
PRPF40A-212ENST00000545856 ZNF788Q6ZQV5 615 aa13.42□□□□□ -0.26
PRPF40A-212ENST00000545856 Q6ZTK2 550 aa13.42□□□□□ -0.26
PRPF40A-212ENST00000545856 OR5D13Q8NGL4 314 aa13.42□□□□□ -0.26
PRPF40A-212ENST00000545856 WDR12Q9GZL7 423 aaKnown RBP13.42□□□□□ -0.26
PRPF40A-212ENST00000545856 WDR13Q9H1Z4 485 aa13.42□□□□□ -0.26
PRPF40A-212ENST00000545856 NCOR1P1Q9H4R4 102 aa13.42□□□□□ -0.26
PRPF40A-212ENST00000545856 SCPEP1Q9HB40 452 aa13.42□□□□□ -0.26
PRPF40A-212ENST00000545856 BAHCC1Q9P281 2608 aa13.42□□□□□ -0.26
PRPF40A-212ENST00000545856 FUOMA2VDF0 154 aa13.41□□□□□ -0.26
PRPF40A-212ENST00000545856 SULT1C2O00338 296 aa13.41□□□□□ -0.26
PRPF40A-212ENST00000545856 DEGS1O15121 323 aa13.41□□□□□ -0.26
PRPF40A-212ENST00000545856 CTDSPLO15194 276 aa13.41□□□□□ -0.26
PRPF40A-212ENST00000545856 MELTFP08582 738 aa13.41□□□□□ -0.26
PRPF40A-212ENST00000545856 ZNF44P15621 663 aa13.41□□□□□ -0.26
PRPF40A-212ENST00000545856 HIST1H1DP16402 221 aaKnown RBP13.41□□□□□ -0.26
PRPF40A-212ENST00000545856 GABRR1P24046 479 aa13.41□□□□□ -0.26
PRPF40A-212ENST00000545856 COL8A2P25067 703 aa13.41□□□□□ -0.26
PRPF40A-212ENST00000545856 PRDX2P32119 198 aa13.41□□□□□ -0.26
PRPF40A-212ENST00000545856 GPR6P46095 362 aaPredicted RBP13.41□□□□□ -0.26
PRPF40A-212ENST00000545856 VEGFCP49767 419 aa13.41□□□□□ -0.26
PRPF40A-212ENST00000545856 IL13RA1P78552 427 aa13.41□□□□□ -0.26
PRPF40A-212ENST00000545856 Q6P435 159 aa13.41□□□□□ -0.26
PRPF40A-212ENST00000545856 SNX22Q96L94 193 aa13.41□□□□□ -0.26
PRPF40A-212ENST00000545856 SOSTQ9BQB4 213 aa13.41□□□□□ -0.26
PRPF40A-212ENST00000545856 PIMREGQ9BSJ6 248 aa13.41□□□□□ -0.26
PRPF40A-212ENST00000545856 KCNK15Q9H427 330 aa13.41□□□□□ -0.26
PRPF40A-212ENST00000545856 TMEM165Q9HC07 324 aa13.41□□□□□ -0.26
PRPF40A-212ENST00000545856 MIOXQ9UGB7 285 aa13.41□□□□□ -0.26
PRPF40A-212ENST00000545856 FLNBO75369 2602 aaKnown RBP13.4□□□□□ -0.26
PRPF40A-212ENST00000545856 FABP12A6NFH5 140 aa13.4□□□□□ -0.26
PRPF40A-212ENST00000545856 RFPL4AA6NLU0 287 aa13.4□□□□□ -0.26
PRPF40A-212ENST00000545856 MCRIP1C9JLW8 97 aa13.4□□□□□ -0.26
PRPF40A-212ENST00000545856 RFPL4AL1F8VTS6 287 aa13.4□□□□□ -0.26
PRPF40A-212ENST00000545856 MFNGO00587 321 aa13.4□□□□□ -0.26
PRPF40A-212ENST00000545856 WNT9BO14905 357 aa13.4□□□□□ -0.26
PRPF40A-212ENST00000545856 SIGLEC5O15389 551 aa13.4□□□□□ -0.26
PRPF40A-212ENST00000545856 OR2H2O95918 312 aa13.4□□□□□ -0.26
PRPF40A-212ENST00000545856 CDK2P24941 298 aa13.4□□□□□ -0.26
PRPF40A-212ENST00000545856 CD80P33681 288 aa13.4□□□□□ -0.26
PRPF40A-212ENST00000545856 NPY4RP50391 375 aa13.4□□□□□ -0.26
PRPF40A-212ENST00000545856 SSBP1Q04837 148 aaKnown RBP13.4□□□□□ -0.26
PRPF40A-212ENST00000545856 LSAMPQ13449 338 aa13.4□□□□□ -0.26
PRPF40A-212ENST00000545856 DNM1P46Q6ZS02 220 aa13.4□□□□□ -0.26
PRPF40A-212ENST00000545856 NLRC3Q7RTR2 1065 aa13.4□□□□□ -0.26
PRPF40A-212ENST00000545856 LURAP1Q96LR2 239 aa13.4□□□□□ -0.26
PRPF40A-212ENST00000545856 NICN1Q9BSH3 213 aa13.4□□□□□ -0.26
PRPF40A-212ENST00000545856 PLEKHJ1Q9NW61 149 aa13.4□□□□□ -0.26
PRPF40A-212ENST00000545856 CACNG2Q9Y698 323 aa13.4□□□□□ -0.26
PRPF40A-212ENST00000545856 DSCAML1Q8TD84 2053 aa13.4□□□□□ -0.27
PRPF40A-212ENST00000545856 IGKV1D-17A0A075B6S4 117 aa13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 A0A0A6YYD4 124 aa13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 C3orf80F5H4A9 247 aa13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 TNFRSF13BO14836 293 aaPredicted RBP13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 PPIHO43447 177 aaKnown RBP13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 SLC25A16P16260 332 aa13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 CD40LGP29965 261 aa13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 ERP29P30040 261 aaKnown RBP13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 CBX5P45973 191 aa13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 TAS2R20P59543 309 aa13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 ZMYND11Q15326 602 aa13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 SIGIRRQ6IA17 410 aa13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 GDPD1Q8N9F7 314 aa13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 OR4M1Q8NGD0 313 aa13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 ST8SIA4Q92187 359 aa13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 FAM168AQ92567 244 aa13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 DMRTB1Q96MA1 342 aa13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 TSC22D3Q99576 134 aa13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 LIME1Q9H400 295 aa13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 AUNIPQ9H7T9 357 aa13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 AKIP1Q9NQ31 210 aa13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 OR14J1Q9UGF5 321 aa13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 MGAT4AQ9UM21 535 aa13.39□□□□□ -0.27
PRPF40A-212ENST00000545856 TRAV24A0A0B4J272 114 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 K7N7A8 449 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 SLC33A1O00400 549 aaPredicted RBP13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 MGST3O14880 152 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 SOCS1O15524 211 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 SSX4O60224 188 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 ZNF737O75373 536 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 TMEM50BP56557 158 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 KRTAP10-9P60411 292 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 MRPS15P82914 257 aaKnown RBP13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 PLA2G7Q13093 441 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 ZNF846Q147U1 533 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 SRSF7Q16629 238 aaKnown RBP eCLIP13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 ZNF260Q3ZCT1 412 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 PAN3Q58A45 887 aaKnown RBP13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 ATAD3CQ5T2N8 411 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms