RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 CAPGP40121 348 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 RPS7P62081 194 aaKnown RBP11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 SNCBQ16143 134 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 TEX30Q5JUR7 227 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 ASPHD1Q5U4P2 390 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 TEX38Q6PEX7 206 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 ACP7Q6ZNF0 438 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 SHFQ7M4L6 423 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 DCXRQ7Z4W1 244 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 ZNF429Q86V71 674 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 STPG2Q8N412 459 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 DRAM1Q8N682 238 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 ZNF676Q8N7Q3 588 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 OR11H1Q8NG94 326 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 OR6K6Q8NGW6 343 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 CYGBQ8WWM9 190 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 PIGCQ92535 297 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 MNTQ99583 582 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 KCNJ15Q99712 375 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 OR51V1Q9H2C8 321 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 OR51I2Q9H344 312 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 CLN6Q9NWW5 311 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 DPM3Q9P2X0 92 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 WARS2Q9UGM6 360 aaKnown RBP11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 VPS13DQ5THJ4 4388 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 FAM183AA6NL82 134 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 CCRL2O00421 344 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 DEDDO75618 318 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 RBP4P02753 201 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 ANXA2P07355 339 aaKnown RBP11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 CNTFRP26992 372 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 GSTT1P30711 240 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 MTNR1BP49286 362 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 POU3F4P49335 361 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 TAF13Q15543 124 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 AADACL4Q5VUY2 407 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 C8orf59Q8N0T1 100 aaPredicted RBP11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 BATF2Q8N1L9 274 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 ZNF454Q8N9F8 522 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 ZNRF4Q8WWF5 429 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 OR8B4Q96RC9 309 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 IL4I1Q96RQ9 567 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 TEAD3Q99594 435 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 FAM110AQ9BQ89 295 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 CLEC7AQ9BXN2 247 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 TMEM133Q9H2Q1 129 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 Q9H521 79 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 MOB4Q9Y3A3 225 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 MPC1Q9Y5U8 109 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 SIRT4Q9Y6E7 314 aaPredicted RBP11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 TMEM14AQ9Y6G1 99 aa11.96□□□□□ -0.49
CLSTN3-216ENST00000545663 DLGAP1O14490 977 aa11.95□□□□□ -0.5
CLSTN3-216ENST00000545663 SAP30O75446 220 aa11.95□□□□□ -0.5
CLSTN3-216ENST00000545663 FSTP19883 344 aa11.95□□□□□ -0.5
CLSTN3-216ENST00000545663 HTR1FP30939 366 aa11.95□□□□□ -0.5
CLSTN3-216ENST00000545663 PYCR1P32322 319 aa11.95□□□□□ -0.5
CLSTN3-216ENST00000545663 EDDM3BP56851 147 aa11.95□□□□□ -0.5
CLSTN3-216ENST00000545663 ADARB1P78563 741 aaKnown RBP11.95□□□□□ -0.5
CLSTN3-216ENST00000545663 APOFQ13790 326 aa11.95□□□□□ -0.5
CLSTN3-216ENST00000545663 FAM57BQ71RH2 274 aa11.95□□□□□ -0.5
CLSTN3-216ENST00000545663 C5orf56Q8N8D9 126 aa11.95□□□□□ -0.5
CLSTN3-216ENST00000545663 CSNK2A3Q8NEV1 391 aa11.95□□□□□ -0.5
CLSTN3-216ENST00000545663 RHOXF1Q8NHV9 184 aa11.95□□□□□ -0.5
CLSTN3-216ENST00000545663 NRG4Q8WWG1 115 aa11.95□□□□□ -0.5
CLSTN3-216ENST00000545663 AQP3Q92482 292 aa11.95□□□□□ -0.5
CLSTN3-216ENST00000545663 ST6GALNAC6Q969X2 333 aa11.95□□□□□ -0.5
CLSTN3-216ENST00000545663 SLAMF6Q96DU3 332 aa11.95□□□□□ -0.5
CLSTN3-216ENST00000545663 INTS14Q96SY0 518 aa11.95□□□□□ -0.5
CLSTN3-216ENST00000545663 YIPF3Q9GZM5 350 aa11.95□□□□□ -0.5
CLSTN3-216ENST00000545663 OR14J1Q9UGF5 321 aa11.95□□□□□ -0.5
CLSTN3-216ENST00000545663 SESN1Q9Y6P5 492 aa11.95□□□□□ -0.5
CLSTN3-216ENST00000545663 IRGMA1A4Y4 181 aa11.94□□□□□ -0.5
CLSTN3-216ENST00000545663 ZNF732B4DXR9 585 aa11.94□□□□□ -0.5
CLSTN3-216ENST00000545663 SLC2A5P22732 501 aa11.94□□□□□ -0.5
CLSTN3-216ENST00000545663 ATP6V1E1P36543 226 aa11.94□□□□□ -0.5
CLSTN3-216ENST00000545663 CX3CR1P49238 355 aa11.94□□□□□ -0.5
CLSTN3-216ENST00000545663 EIF2B1Q14232 305 aaKnown RBP11.94□□□□□ -0.5
CLSTN3-216ENST00000545663 PNLIPRP3Q17RR3 467 aa11.94□□□□□ -0.5
CLSTN3-216ENST00000545663 LINC01590Q5TEZ4 76 aa11.94□□□□□ -0.5
CLSTN3-216ENST00000545663 ZNF691Q5VV52 312 aa11.94□□□□□ -0.5
CLSTN3-216ENST00000545663 FAM53AQ6NSI3 398 aaPredicted RBP11.94□□□□□ -0.5
CLSTN3-216ENST00000545663 IZUMO2Q6UXV1 221 aa11.94□□□□□ -0.5
CLSTN3-216ENST00000545663 PRSS45Q7RTY3 260 aa11.94□□□□□ -0.5
CLSTN3-216ENST00000545663 SLC35E3Q7Z769 313 aa11.94□□□□□ -0.5
CLSTN3-216ENST00000545663 TIGD4Q8IY51 512 aa11.94□□□□□ -0.5
CLSTN3-216ENST00000545663 DCUN1D4Q92564 292 aa11.94□□□□□ -0.5
CLSTN3-216ENST00000545663 ZNF714Q96N38 554 aa11.94□□□□□ -0.5
CLSTN3-216ENST00000545663 CNN2Q99439 309 aaKnown RBP11.94□□□□□ -0.5
CLSTN3-216ENST00000545663 NABP2Q9BQ15 211 aa11.94□□□□□ -0.5
CLSTN3-216ENST00000545663 RAB26Q9ULW5 256 aa11.94□□□□□ -0.5
CLSTN3-216ENST00000545663 COMMD3-BMI1R4GMX3 469 aa11.94□□□□□ -0.5
CLSTN3-216ENST00000545663 MUC4Q99102 2169 aa11.94□□□□□ -0.5
CLSTN3-216ENST00000545663 FAM172BPA6NC97 362 aa11.93□□□□□ -0.5
CLSTN3-216ENST00000545663 CST4P01036 141 aa11.93□□□□□ -0.5
CLSTN3-216ENST00000545663 APOC1P02654 83 aa11.93□□□□□ -0.5
CLSTN3-216ENST00000545663 GYPBP06028 91 aa11.93□□□□□ -0.5
CLSTN3-216ENST00000545663 SLC15A1P46059 708 aa11.93□□□□□ -0.5
CLSTN3-216ENST00000545663 CXorf66Q5JRM2 361 aaPredicted RBP11.93□□□□□ -0.5
CLSTN3-216ENST00000545663 HAGHLQ6PII5 290 aaPredicted RBP11.93□□□□□ -0.5
CLSTN3-216ENST00000545663 OR51L1Q8NGJ5 315 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms