RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 SLC17A2O00624 439 aa17.79■□□□□ 0.44
BPTF-208ENST00000544778 TBX19O60806 448 aa17.79■□□□□ 0.44
BPTF-208ENST00000544778 C9orf50Q5SZB4 431 aa17.79■□□□□ 0.44
BPTF-208ENST00000544778 FAHD2BQ6P2I3 314 aaPredicted RBP17.79■□□□□ 0.44
BPTF-208ENST00000544778 FAHD2AQ96GK7 314 aa17.79■□□□□ 0.44
BPTF-208ENST00000544778 PRRX2Q99811 253 aa17.79■□□□□ 0.44
BPTF-208ENST00000544778 TMSB15BA0A087X1C1 80 aa17.79■□□□□ 0.44
BPTF-208ENST00000544778 C16orf47Q6ZP98 133 aaPredicted RBP17.79■□□□□ 0.44
BPTF-208ENST00000544778 CT55Q8WUE5 264 aa17.79■□□□□ 0.44
BPTF-208ENST00000544778 ZNF385DQ9H6B1 395 aa17.79■□□□□ 0.44
BPTF-208ENST00000544778 AKIRIN1Q9H9L7 192 aaPredicted RBP17.79■□□□□ 0.44
BPTF-208ENST00000544778 ZNF324O75467 553 aaPredicted RBP17.79■□□□□ 0.44
BPTF-208ENST00000544778 MRPS11P82912 194 aaKnown RBP17.79■□□□□ 0.44
BPTF-208ENST00000544778 SPANXN1Q5VSR9 72 aa17.79■□□□□ 0.44
BPTF-208ENST00000544778 BCL7CQ8WUZ0 217 aaPredicted RBP17.79■□□□□ 0.44
BPTF-208ENST00000544778 LPAR5Q9H1C0 372 aa17.79■□□□□ 0.44
BPTF-208ENST00000544778 ASB1Q9Y576 335 aa17.79■□□□□ 0.44
BPTF-208ENST00000544778 CLDN18P56856 261 aa17.79■□□□□ 0.44
BPTF-208ENST00000544778 R3HDM4Q96D70 268 aa17.79■□□□□ 0.44
BPTF-208ENST00000544778 KCNK15Q9H427 330 aa17.79■□□□□ 0.44
BPTF-208ENST00000544778 OOEPA6NGQ2 149 aa17.79■□□□□ 0.44
BPTF-208ENST00000544778 HIST1H1DP16402 221 aaKnown RBP17.79■□□□□ 0.44
BPTF-208ENST00000544778 ATP6V1FQ16864 119 aa17.79■□□□□ 0.44
BPTF-208ENST00000544778 WDR73Q6P4I2 378 aa17.79■□□□□ 0.44
BPTF-208ENST00000544778 C5P01031 1676 aa17.79■□□□□ 0.44
BPTF-208ENST00000544778 WDR38Q5JTN6 314 aa17.78■□□□□ 0.44
BPTF-208ENST00000544778 OR4P4Q8NGL7 312 aa17.78■□□□□ 0.44
BPTF-208ENST00000544778 WSB1Q9Y6I7 421 aa17.78■□□□□ 0.44
BPTF-208ENST00000544778 HYAL3O43820 417 aaPredicted RBP17.78■□□□□ 0.44
BPTF-208ENST00000544778 ALX3O95076 343 aa17.78■□□□□ 0.44
BPTF-208ENST00000544778 NUFIP2Q7Z417 695 aaKnown RBP17.78■□□□□ 0.44
BPTF-208ENST00000544778 PERPQ96FX8 193 aa17.78■□□□□ 0.44
BPTF-208ENST00000544778 SYT11Q9BT88 431 aa17.78■□□□□ 0.44
BPTF-208ENST00000544778 ZNF519Q8TB69 540 aa17.78■□□□□ 0.44
BPTF-208ENST00000544778 ABHD3Q8WU67 409 aa17.78■□□□□ 0.44
BPTF-208ENST00000544778 APOBEC4Q8WW27 367 aaKnown RBP17.78■□□□□ 0.44
BPTF-208ENST00000544778 OR2J1Q9GZK6 312 aa17.78■□□□□ 0.44
BPTF-208ENST00000544778 PRDM7Q9NQW5 492 aa17.78■□□□□ 0.44
BPTF-208ENST00000544778 CCL21O00585 134 aa17.78■□□□□ 0.44
BPTF-208ENST00000544778 AMMECR1LQ6DCA0 310 aa17.78■□□□□ 0.44
BPTF-208ENST00000544778 LIAT1Q6ZQX7 453 aa17.78■□□□□ 0.44
BPTF-208ENST00000544778 KLF7O75840 302 aaPredicted RBP17.78■□□□□ 0.44
BPTF-208ENST00000544778 EML2O95834 649 aa17.78■□□□□ 0.44
BPTF-208ENST00000544778 CCR2P41597 374 aa17.78■□□□□ 0.44
BPTF-208ENST00000544778 PIK3IP1Q96FE7 263 aa17.78■□□□□ 0.44
BPTF-208ENST00000544778 ZNF552Q9H707 407 aaPredicted RBP17.78■□□□□ 0.44
BPTF-208ENST00000544778 TRAV20A0A0B4J274 112 aa17.77■□□□□ 0.44
BPTF-208ENST00000544778 IGSF23A1L1A6 192 aa17.77■□□□□ 0.44
BPTF-208ENST00000544778 PRNTQ86SH4 94 aa17.77■□□□□ 0.44
BPTF-208ENST00000544778 FAM222BQ8WU58 562 aa17.77■□□□□ 0.44
BPTF-208ENST00000544778 NTNG2Q96CW9 530 aa17.77■□□□□ 0.44
BPTF-208ENST00000544778 ANXA10Q9UJ72 324 aa17.77■□□□□ 0.44
BPTF-208ENST00000544778 MOB4Q9Y3A3 225 aa17.77■□□□□ 0.44
BPTF-208ENST00000544778 GABRA1P14867 456 aa17.77■□□□□ 0.44
BPTF-208ENST00000544778 LAMA4Q16363 1823 aa17.77■□□□□ 0.44
BPTF-208ENST00000544778 PRF1P14222 555 aa17.77■□□□□ 0.44
BPTF-208ENST00000544778 COL13A1Q5TAT6 717 aaPredicted RBP17.77■□□□□ 0.44
BPTF-208ENST00000544778 CNRIP1Q96F85 164 aaPredicted RBP17.77■□□□□ 0.44
BPTF-208ENST00000544778 RPL29P47914 159 aaKnown RBP17.77■□□□□ 0.44
BPTF-208ENST00000544778 SRSF5Q13243 272 aaKnown RBP17.77■□□□□ 0.44
BPTF-208ENST00000544778 C16orf82Q7Z2V1 217 aa17.77■□□□□ 0.44
BPTF-208ENST00000544778 MRAP2Q96G30 205 aa17.77■□□□□ 0.44
BPTF-208ENST00000544778 POM121Q96HA1 1249 aa17.77■□□□□ 0.44
BPTF-208ENST00000544778 PDFQ9HBH1 243 aa17.77■□□□□ 0.44
BPTF-208ENST00000544778 MIA3Q5JRA6 1907 aa17.77■□□□□ 0.43
BPTF-208ENST00000544778 OR2W3Q7Z3T1 314 aa17.77■□□□□ 0.43
BPTF-208ENST00000544778 ZNF680Q8NEM1 530 aa17.77■□□□□ 0.43
BPTF-208ENST00000544778 RAB37Q96AX2 223 aa17.77■□□□□ 0.43
BPTF-208ENST00000544778 TECRQ9NZ01 308 aaKnown RBP17.77■□□□□ 0.43
BPTF-208ENST00000544778 PTHLHP12272 177 aa17.77■□□□□ 0.43
BPTF-208ENST00000544778 SLC6A1P30531 599 aa17.77■□□□□ 0.43
BPTF-208ENST00000544778 PGFP49763 221 aa17.77■□□□□ 0.43
BPTF-208ENST00000544778 ARRDC1Q8N5I2 433 aa17.77■□□□□ 0.43
BPTF-208ENST00000544778 OR2D3Q8NGH3 330 aa17.77■□□□□ 0.43
BPTF-208ENST00000544778 SSMEM1Q8WWF3 244 aa17.77■□□□□ 0.43
BPTF-208ENST00000544778 CHODLQ9H9P2 273 aa17.77■□□□□ 0.43
BPTF-208ENST00000544778 COX6B1P14854 86 aa17.76■□□□□ 0.43
BPTF-208ENST00000544778 BCL2L10Q9HD36 194 aa17.76■□□□□ 0.43
BPTF-208ENST00000544778 ZFP64Q9NPA5 681 aa17.76■□□□□ 0.43
BPTF-208ENST00000544778 CYSLTR2Q9NS75 346 aa17.76■□□□□ 0.43
BPTF-208ENST00000544778 C9orf170A2RU37 121 aa17.76■□□□□ 0.43
BPTF-208ENST00000544778 TMEM167BQ9NRX6 74 aa17.76■□□□□ 0.43
BPTF-208ENST00000544778 HSPB8Q9UJY1 196 aa17.76■□□□□ 0.43
BPTF-208ENST00000544778 WNT5AP41221 380 aa17.76■□□□□ 0.43
BPTF-208ENST00000544778 COL19A1Q14993 1142 aa17.76■□□□□ 0.43
BPTF-208ENST00000544778 ZDHHC22Q8N966 263 aa17.76■□□□□ 0.43
BPTF-208ENST00000544778 OR4X1Q8NH49 305 aa17.76■□□□□ 0.43
BPTF-208ENST00000544778 A0A1B0GUL6 1792 aa17.76■□□□□ 0.43
BPTF-208ENST00000544778 ELOBQ15370 118 aa17.76■□□□□ 0.43
BPTF-208ENST00000544778 C10orf113Q5VZT2 155 aa17.76■□□□□ 0.43
BPTF-208ENST00000544778 OR4D9Q8NGE8 314 aa17.76■□□□□ 0.43
BPTF-208ENST00000544778 VSTM2AQ8TAG5 236 aa17.76■□□□□ 0.43
BPTF-208ENST00000544778 SNRNP40Q96DI7 357 aaKnown RBP17.76■□□□□ 0.43
BPTF-208ENST00000544778 R3HDMLQ9H3Y0 253 aa17.76■□□□□ 0.43
BPTF-208ENST00000544778 CGB1A6NKQ9 187 aa17.76■□□□□ 0.43
BPTF-208ENST00000544778 SIAH2O43255 324 aa17.76■□□□□ 0.43
BPTF-208ENST00000544778 HAND1O96004 215 aa17.76■□□□□ 0.43
BPTF-208ENST00000544778 CST4P01036 141 aa17.76■□□□□ 0.43
BPTF-208ENST00000544778 PRSS8Q16651 343 aa17.76■□□□□ 0.43
BPTF-208ENST00000544778 RNF165Q6ZSG1 346 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms