RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 KCNJ3P48549 501 aa11.27□□□□□ -0.61
CHD4-211ENST00000544484 SCAND1P57086 179 aa11.27□□□□□ -0.61
CHD4-211ENST00000544484 PIK3IP1Q96FE7 263 aa11.27□□□□□ -0.61
CHD4-211ENST00000544484 MIXL1Q9H2W2 232 aa11.27□□□□□ -0.61
CHD4-211ENST00000544484 DOK5Q9P104 306 aa11.27□□□□□ -0.61
CHD4-211ENST00000544484 ANXA10Q9UJ72 324 aa11.27□□□□□ -0.61
CHD4-211ENST00000544484 SPTBP11277 2137 aa11.27□□□□□ -0.61
CHD4-211ENST00000544484 CD3EP07766 207 aa11.26□□□□□ -0.61
CHD4-211ENST00000544484 ERVFC1-1P60608 527 aa11.26□□□□□ -0.61
CHD4-211ENST00000544484 TNFRSF19Q9NS68 423 aa11.26□□□□□ -0.61
CHD4-211ENST00000544484 CST2P09228 141 aa11.26□□□□□ -0.61
CHD4-211ENST00000544484 CNN1P51911 297 aaKnown RBP11.26□□□□□ -0.61
CHD4-211ENST00000544484 ISXQ2M1V0 245 aa11.26□□□□□ -0.61
CHD4-211ENST00000544484 ETV3LQ6ZN32 361 aa11.26□□□□□ -0.61
CHD4-211ENST00000544484 LSM2Q9Y333 95 aaKnown RBP11.26□□□□□ -0.61
CHD4-211ENST00000544484 IGFBP7Q16270 282 aa11.26□□□□□ -0.61
CHD4-211ENST00000544484 FAM219AQ8IW50 185 aa11.26□□□□□ -0.61
CHD4-211ENST00000544484 DYRK2Q92630 601 aa11.26□□□□□ -0.61
CHD4-211ENST00000544484 GAL3ST2Q9H3Q3 398 aa11.26□□□□□ -0.61
CHD4-211ENST00000544484 MSL2Q9HCI7 577 aa11.26□□□□□ -0.61
CHD4-211ENST00000544484 OR1A1Q9P1Q5 309 aa11.26□□□□□ -0.61
CHD4-211ENST00000544484 MRPS18BQ9Y676 258 aaKnown RBP11.26□□□□□ -0.61
CHD4-211ENST00000544484 QSER1Q2KHR3 1735 aa11.26□□□□□ -0.61
CHD4-211ENST00000544484 PIGYQ3MUY2 71 aa11.26□□□□□ -0.61
CHD4-211ENST00000544484 TMEM211Q6ICI0 200 aa11.26□□□□□ -0.61
CHD4-211ENST00000544484 OR2C3Q8N628 320 aa11.26□□□□□ -0.61
CHD4-211ENST00000544484 OR5D13Q8NGL4 314 aa11.26□□□□□ -0.61
CHD4-211ENST00000544484 MIA3Q5JRA6 1907 aa11.26□□□□□ -0.61
CHD4-211ENST00000544484 PNPP00491 289 aa11.26□□□□□ -0.61
CHD4-211ENST00000544484 FAM3AP98173 230 aa11.26□□□□□ -0.61
CHD4-211ENST00000544484 SPICQ8N5J4 248 aa11.26□□□□□ -0.61
CHD4-211ENST00000544484 CACFD1Q9UGQ2 172 aa11.26□□□□□ -0.61
CHD4-211ENST00000544484 SEC14L6B5MCN3 397 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 RD3LP0DJH9 198 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 RND1Q92730 232 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 RAB40CQ96S21 281 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 V9GYH0 126 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 ZFC3H1O60293 1989 aaKnown RBP11.25□□□□□ -0.61
CHD4-211ENST00000544484 TBC1D26Q86UD7 250 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 FBXL17Q9UF56 701 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 M0QZ24 198 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 PRSS53Q2L4Q9 553 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 ZNF429Q86V71 674 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 SLC25A45Q8N413 288 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 SLC26A10Q8NG04 563 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 GPR137Q96N19 417 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 ZDHHC11Q9H8X9 412 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 TMEM38BQ9NVV0 291 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 NTMQ9P121 344 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 SPTBN2O15020 2390 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 A0A0J9YW62 118 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 SPINK4O60575 86 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 RAB7AP51149 207 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 PJVKQ0ZLH3 352 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 SEZ6L2Q6UXD5 910 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 TMEM91Q6ZNR0 172 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 ADAT3Q96EY9 351 aaPredicted RBP11.25□□□□□ -0.61
CHD4-211ENST00000544484 SLC25A22Q9H936 323 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 WDR54Q9H977 334 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 KLHDC2Q9Y2U9 406 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 COL11A1P12107 1806 aaPredicted RBP11.25□□□□□ -0.61
CHD4-211ENST00000544484 RGPD4Q7Z3J3 1758 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 CTSBP07858 339 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 SLC6A1P30531 599 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 RFLNBQ8N5W9 214 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 SLC25A40Q8TBP6 338 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 ZNRF4Q8WWF5 429 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 GLRX2Q9NS18 164 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 TDRD15B5MCY1 1934 aaKnown RBP11.25□□□□□ -0.61
CHD4-211ENST00000544484 SP1P08047 785 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 FCER1GP30273 86 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 RNF133Q8WVZ7 376 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 MAP6Q96JE9 813 aa11.25□□□□□ -0.61
CHD4-211ENST00000544484 UPK3AO75631 287 aa11.24□□□□□ -0.61
CHD4-211ENST00000544484 FCARP24071 287 aa11.24□□□□□ -0.61
CHD4-211ENST00000544484 FGF8P55075 233 aaPredicted RBP11.24□□□□□ -0.61
CHD4-211ENST00000544484 RAG2P55895 527 aa11.24□□□□□ -0.61
CHD4-211ENST00000544484 CLEC18BQ6UXF7 455 aa11.24□□□□□ -0.61
CHD4-211ENST00000544484 OR6C3Q9NZP0 311 aa11.24□□□□□ -0.61
CHD4-211ENST00000544484 HAND1O96004 215 aa11.24□□□□□ -0.61
CHD4-211ENST00000544484 EFNB2P52799 333 aa11.24□□□□□ -0.61
CHD4-211ENST00000544484 MPPED2Q15777 294 aa11.24□□□□□ -0.61
CHD4-211ENST00000544484 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.24□□□□□ -0.61
CHD4-211ENST00000544484 BLNKQ8WV28 456 aa11.24□□□□□ -0.61
CHD4-211ENST00000544484 TTTY12Q9BZ98 90 aa11.24□□□□□ -0.61
CHD4-211ENST00000544484 MRPS11P82912 194 aaKnown RBP11.24□□□□□ -0.61
CHD4-211ENST00000544484 HSD17B10Q99714 261 aaKnown RBP11.24□□□□□ -0.61
CHD4-211ENST00000544484 WFDC6Q9BQY6 131 aa11.24□□□□□ -0.61
CHD4-211ENST00000544484 XKRY2A2RUG3 117 aa11.24□□□□□ -0.61
CHD4-211ENST00000544484 CXCL3P19876 107 aa11.24□□□□□ -0.61
CHD4-211ENST00000544484 CSF2RBP32927 897 aa11.24□□□□□ -0.61
CHD4-211ENST00000544484 PLPPR5Q32ZL2 321 aa11.24□□□□□ -0.61
CHD4-211ENST00000544484 PRSS27Q9BQR3 290 aa11.24□□□□□ -0.61
CHD4-211ENST00000544484 RAB1BQ9H0U4 201 aa11.24□□□□□ -0.61
CHD4-211ENST00000544484 SAP30LQ9HAJ7 183 aa11.24□□□□□ -0.61
CHD4-211ENST00000544484 PILRAQ9UKJ1 303 aa11.24□□□□□ -0.61
CHD4-211ENST00000544484 WSB1Q9Y6I7 421 aa11.24□□□□□ -0.61
CHD4-211ENST00000544484 CEP250Q9BV73 2442 aa11.24□□□□□ -0.61
CHD4-211ENST00000544484 NANOS3P60323 173 aaKnown RBP11.24□□□□□ -0.61
CHD4-211ENST00000544484 CLLU1Q5K131 121 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms