RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 ZNF322Q6U7Q0 402 aaPredicted RBP12.17□□□□□ -0.46
CD4-212ENST00000544344 GAL3ST2Q9H3Q3 398 aa12.17□□□□□ -0.46
CD4-212ENST00000544344 ARL8BQ9NVJ2 186 aa12.17□□□□□ -0.46
CD4-212ENST00000544344 TAS2R3Q9NYW6 316 aa12.17□□□□□ -0.46
CD4-212ENST00000544344 SLC7A11Q9UPY5 501 aa12.17□□□□□ -0.46
CD4-212ENST00000544344 TMEM14AQ9Y6G1 99 aa12.17□□□□□ -0.46
CD4-212ENST00000544344 TRBV2A0A0J9YWF9 115 aa12.16□□□□□ -0.46
CD4-212ENST00000544344 LINC01548A6NM66 108 aa12.16□□□□□ -0.46
CD4-212ENST00000544344 OOSP1A8MZH6 123 aa12.16□□□□□ -0.46
CD4-212ENST00000544344 RRP9O43818 475 aaKnown RBP12.16□□□□□ -0.46
CD4-212ENST00000544344 FAM106CPP0CH98 169 aa12.16□□□□□ -0.46
CD4-212ENST00000544344 CALCBP10092 127 aa12.16□□□□□ -0.46
CD4-212ENST00000544344 BCL3P20749 454 aa12.16□□□□□ -0.46
CD4-212ENST00000544344 ECI1P42126 302 aa12.16□□□□□ -0.46
CD4-212ENST00000544344 GLIPR1P48060 266 aa12.16□□□□□ -0.46
CD4-212ENST00000544344 FUT6P51993 359 aa12.16□□□□□ -0.46
CD4-212ENST00000544344 GK3PQ14409 553 aa12.16□□□□□ -0.46
CD4-212ENST00000544344 DEFB136Q30KP8 78 aa12.16□□□□□ -0.46
CD4-212ENST00000544344 CCDC144NLQ6NUI1 221 aa12.16□□□□□ -0.46
CD4-212ENST00000544344 ENTHD1Q8IYW4 607 aa12.16□□□□□ -0.46
CD4-212ENST00000544344 FAM58AQ8N1B3 248 aa12.16□□□□□ -0.46
CD4-212ENST00000544344 COMMD1Q8N668 190 aa12.16□□□□□ -0.46
CD4-212ENST00000544344 CREB3L1Q96BA8 519 aa12.16□□□□□ -0.46
CD4-212ENST00000544344 LYSTQ99698 3801 aa12.16□□□□□ -0.46
CD4-212ENST00000544344 DCLRE1BQ9H816 532 aa12.16□□□□□ -0.46
CD4-212ENST00000544344 SLC25A19Q9HC21 320 aa12.16□□□□□ -0.46
CD4-212ENST00000544344 MRM2Q9UI43 246 aaKnown RBP12.16□□□□□ -0.46
CD4-212ENST00000544344 TRGV10A0A0A0MS01 117 aa12.15□□□□□ -0.46
CD4-212ENST00000544344 SERPINE3A8MV23 424 aa12.15□□□□□ -0.46
CD4-212ENST00000544344 H3BSH0 61 aa12.15□□□□□ -0.46
CD4-212ENST00000544344 IGHG2P01859 326 aa12.15□□□□□ -0.46
CD4-212ENST00000544344 MNDAP41218 407 aa12.15□□□□□ -0.46
CD4-212ENST00000544344 RAB25P57735 213 aa12.15□□□□□ -0.46
CD4-212ENST00000544344 CXCR4P61073 352 aa12.15□□□□□ -0.46
CD4-212ENST00000544344 MS4A2Q01362 244 aa12.15□□□□□ -0.46
CD4-212ENST00000544344 AESQ08117 197 aa12.15□□□□□ -0.46
CD4-212ENST00000544344 C17orf58Q2M2W7 97 aa12.15□□□□□ -0.46
CD4-212ENST00000544344 FAM98BQ52LJ0 330 aaKnown RBP12.15□□□□□ -0.46
CD4-212ENST00000544344 C9orf66Q5T8R8 295 aa12.15□□□□□ -0.46
CD4-212ENST00000544344 C16orf89Q6UX73 402 aa12.15□□□□□ -0.46
CD4-212ENST00000544344 Q8IYB0 196 aa12.15□□□□□ -0.46
CD4-212ENST00000544344 HS3ST5Q8IZT8 346 aa12.15□□□□□ -0.46
CD4-212ENST00000544344 STPG2Q8N412 459 aa12.15□□□□□ -0.46
CD4-212ENST00000544344 OR56B4Q8NH76 319 aa12.15□□□□□ -0.46
CD4-212ENST00000544344 CHST5Q9GZS9 411 aa12.15□□□□□ -0.46
CD4-212ENST00000544344 ARGLU1Q9NWB6 273 aaPredicted RBP12.15□□□□□ -0.46
CD4-212ENST00000544344 TAGLN3Q9UI15 199 aa12.15□□□□□ -0.46
CD4-212ENST00000544344 SNX5Q9Y5X3 404 aa12.15□□□□□ -0.46
CD4-212ENST00000544344 A0A1W2PPI3 338 aa12.14□□□□□ -0.47
CD4-212ENST00000544344 SIRPB1O00241 398 aa12.14□□□□□ -0.47
CD4-212ENST00000544344 TOR1AO14656 332 aa12.14□□□□□ -0.47
CD4-212ENST00000544344 FGF16O43320 207 aa12.14□□□□□ -0.47
CD4-212ENST00000544344 RPLP1P05386 114 aaKnown RBP12.14□□□□□ -0.47
CD4-212ENST00000544344 PRRX1P54821 245 aa12.14□□□□□ -0.47
CD4-212ENST00000544344 SNU13P55769 128 aaKnown RBP12.14□□□□□ -0.47
CD4-212ENST00000544344 CDC42P60953 191 aa12.14□□□□□ -0.47
CD4-212ENST00000544344 CBX1P83916 185 aa12.14□□□□□ -0.47
CD4-212ENST00000544344 DIAPH2-AS1Q14236 149 aa12.14□□□□□ -0.47
CD4-212ENST00000544344 RBM39Q14498 530 aaKnown RBP12.14□□□□□ -0.47
CD4-212ENST00000544344 ODF4Q2M2E3 257 aa12.14□□□□□ -0.47
CD4-212ENST00000544344 SPIN3Q5JUX0 258 aa12.14□□□□□ -0.47
CD4-212ENST00000544344 LCNL1Q6ZST4 164 aa12.14□□□□□ -0.47
CD4-212ENST00000544344 SBSPONQ8IVN8 264 aa12.14□□□□□ -0.47
CD4-212ENST00000544344 DRAM1Q8N682 238 aa12.14□□□□□ -0.47
CD4-212ENST00000544344 Q8NFD4 153 aa12.14□□□□□ -0.47
CD4-212ENST00000544344 COQ2Q96H96 371 aa12.14□□□□□ -0.47
CD4-212ENST00000544344 RCHY1Q96PM5 261 aa12.14□□□□□ -0.47
CD4-212ENST00000544344 CNN2Q99439 309 aaKnown RBP12.14□□□□□ -0.47
CD4-212ENST00000544344 CSMD3Q7Z407 3707 aa12.14□□□□□ -0.47
CD4-212ENST00000544344 SORL1Q92673 2214 aa12.14□□□□□ -0.47
CD4-212ENST00000544344 ODAMA1E959 279 aa12.13□□□□□ -0.47
CD4-212ENST00000544344 SEC14L6B5MCN3 397 aa12.13□□□□□ -0.47
CD4-212ENST00000544344 SNX3O60493 162 aa12.13□□□□□ -0.47
CD4-212ENST00000544344 OR2H2O95918 312 aa12.13□□□□□ -0.47
CD4-212ENST00000544344 CST1P01037 141 aa12.13□□□□□ -0.47
CD4-212ENST00000544344 RAP2AP10114 183 aa12.13□□□□□ -0.47
CD4-212ENST00000544344 PRKACAP17612 351 aa12.13□□□□□ -0.47
CD4-212ENST00000544344 PRKACGP22612 351 aa12.13□□□□□ -0.47
CD4-212ENST00000544344 SLC35B1P78383 322 aa12.13□□□□□ -0.47
CD4-212ENST00000544344 KIR2DS1Q14954 304 aa12.13□□□□□ -0.47
CD4-212ENST00000544344 KPNB1Q14974 876 aaKnown RBP12.13□□□□□ -0.47
CD4-212ENST00000544344 SSX6Q7RTT6 188 aa12.13□□□□□ -0.47
CD4-212ENST00000544344 BCDIN3DQ7Z5W3 292 aaKnown RBP12.13□□□□□ -0.47
CD4-212ENST00000544344 SLC35E3Q7Z769 313 aa12.13□□□□□ -0.47
CD4-212ENST00000544344 DHFR2Q86XF0 187 aa12.13□□□□□ -0.47
CD4-212ENST00000544344 CATSPERDQ86XM0 798 aa12.13□□□□□ -0.47
CD4-212ENST00000544344 SLC35F2Q8IXU6 374 aa12.13□□□□□ -0.47
CD4-212ENST00000544344 OR5M8Q8NGP6 311 aa12.13□□□□□ -0.47
CD4-212ENST00000544344 BORCS8Q96FH0 119 aa12.13□□□□□ -0.47
CD4-212ENST00000544344 PLEKHA1Q9HB21 404 aa12.13□□□□□ -0.47
CD4-212ENST00000544344 ADGRL4Q9HBW9 690 aa12.13□□□□□ -0.47
CD4-212ENST00000544344 HMG20AQ9NP66 347 aa12.13□□□□□ -0.47
CD4-212ENST00000544344 ZNF446Q9NWS9 450 aa12.13□□□□□ -0.47
CD4-212ENST00000544344 TVP23BQ9NYZ1 205 aa12.13□□□□□ -0.47
CD4-212ENST00000544344 ZNF256Q9Y2P7 627 aaPredicted RBP12.13□□□□□ -0.47
CD4-212ENST00000544344 STARD9Q9P2P6 4700 aa12.12□□□□□ -0.47
CD4-212ENST00000544344 IGKV1-9A0A0C4DH69 117 aa12.12□□□□□ -0.47
CD4-212ENST00000544344 IGKV1-12A0A0C4DH73 117 aa12.12□□□□□ -0.47
CD4-212ENST00000544344 SYT7O43581 403 aa12.12□□□□□ -0.47
CD4-212ENST00000544344 PRKYO43930 277 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms