RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	DUX4L5	P0CJ88	424 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	DUX4L6	P0CJ89	424 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	DUX4L7	P0CJ90	424 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	SELL	P14151	372 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	ZNF182	P17025	639 aa	Predicted RBP	8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	CPT2	P23786	658 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	CFP	P27918	469 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	IL2RG	P31785	369 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	QRFP	P83859	136 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	UNC119	Q13432	240 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	GRK1	Q15835	563 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAM189A2	Q15884	450 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	MPV17L	Q2QL34	196 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	PAN3	Q58A45	887 aa	Known RBP	8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	NHLRC3	Q5JS37	347 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545		Q6P435	159 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	MZT2A	Q6P582	158 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	BRICD5	Q6PL45	260 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	DUX4L9	Q6RFH8	374 aa	Predicted RBP	8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	LINC00596	Q86U02	117 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	CHST4	Q8NCG5	386 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	OR5H6	Q8NGV6	325 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	ACOT12	Q8WYK0	555 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	H1FX	Q92522	213 aa	Known RBP	8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	KCTD12	Q96CX2	325 aa	Known RBP	8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	SNX22	Q96L94	193 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545		Q96M66	194 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	DCUN1D5	Q9BTE7	237 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	SSBP3	Q9BWW4	388 aa	Predicted RBP	8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	BARHL1	Q9BZE3	327 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	CHST6	Q9GZX3	395 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	RBM38	Q9H0Z9	239 aa	Known RBP	8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	ATG5	Q9H1Y0	275 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	SPACA1	Q9HBV2	294 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	BATF3	Q9NR55	127 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	COMMD3	Q9UBI1	195 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	KAAG1	Q9UBP8	84 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	CTSZ	Q9UBR2	303 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	DUX4	Q9UBX2	424 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	ZNF222	Q9UK12	451 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	PEX16	Q9Y5Y5	336 aa		8.46	□□□□□ -1.06
CPSF7-221	ENST00000543545	ANKRD17	O75179	2603 aa	Known RBP	8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	TMEM82	A0PJX8	343 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	MCRIP1	C9JLW8	97 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	LDLRAD4	O15165	306 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	FOXH1	O75593	365 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	TK1	P04183	234 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	RAB6A	P20340	208 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	FUT3	P21217	361 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	BLVRB	P30043	206 aa	Predicted RBP	8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	VEGFC	P49767	419 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	NPY4R	P50391	375 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	EFNB2	P52799	333 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	EDDM3B	P56851	147 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	SEC61A1	P61619	476 aa	Known RBP	8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	LCN2	P80188	198 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	PLA2G7	Q13093	441 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	EDDM3A	Q14507	147 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	WDR25	Q64LD2	544 aa	Predicted RBP	8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	RAB12	Q6IQ22	244 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	GDPD3	Q7L5L3	318 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	CIART	Q8N365	385 aa	Predicted RBP	8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	BPIFB2	Q8N4F0	458 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	SAMD12	Q8N8I0	201 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	SUMF2	Q8NBJ7	301 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	OR4S1	Q8NGB4	309 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	OR56B1	Q8NGI3	324 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	OR5D13	Q8NGL4	314 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	NICN1	Q9BSH3	213 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	DPCD	Q9BVM2	203 aa	Predicted RBP	8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	LPAR5	Q9H1C0	372 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	PPA2	Q9H2U2	334 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	SEBOX	Q9HB31	216 aa	Predicted RBP	8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	PLEKHJ1	Q9NW61	149 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	RHBDL2	Q9NX52	303 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	FBLN5	Q9UBX5	448 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	SPATA2	Q9UM82	520 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	ETV7	Q9Y603	341 aa		8.45	□□□□□ -1.06
CPSF7-221	ENST00000543545	DYSF	O75923	2080 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545		A0A075B6Q4	140 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	LOC105371242	A0A075B767	164 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	TRAV24	A0A0B4J272	114 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	FUOM	A2VDF0	154 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAM90A10P	A6NDY2	464 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAM90A18P	A6NE21	464 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAM90A16P	A6NEW6	464 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAM90A20P	A6NIJ5	464 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAM90A8P	A6NJQ4	464 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAM90A7P	A6NKC0	464 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAM90A22P	A8MWA6	464 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAM90A12P	A8MX19	464 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAM90A5P	A8MXJ8	464 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAM90A23P	A8MXZ1	464 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	FAM157A	C9JC47	383 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545		F5H0A9	414 aa	Predicted RBP	8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545		K7N7A8	449 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	SLC33A1	O00400	549 aa	Predicted RBP	8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	RGS5	O15539	181 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	PSPN	O60542	156 aa		8.44	□□□□□ -1.06
CPSF7-221	ENST00000543545	PDCD6	O75340	191 aa		8.44	□□□□□ -1.06

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms