RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 TCRBV3S1A0A5B6 114 aa2.53□□□□□ -2
USP28-210ENST00000542033 SMCO3A2RU48 225 aa2.53□□□□□ -2
USP28-210ENST00000542033 NKX2-6A6NCS4 301 aa2.53□□□□□ -2
USP28-210ENST00000542033 PRORSD1PA6NEY8 169 aa2.53□□□□□ -2
USP28-210ENST00000542033 ARL5CA6NH57 179 aa2.53□□□□□ -2
USP28-210ENST00000542033 RPL37AP8A6NKH3 93 aa2.53□□□□□ -2
USP28-210ENST00000542033 OR5H1A6NKK0 313 aa2.53□□□□□ -2
USP28-210ENST00000542033 HMSDA8MTL9 139 aa2.53□□□□□ -2
USP28-210ENST00000542033 EFCAB9A8MZ26 197 aa2.53□□□□□ -2
USP28-210ENST00000542033 GFYI3L273 518 aa2.53□□□□□ -2
USP28-210ENST00000542033 DLGAP1O14490 977 aa2.53□□□□□ -2
USP28-210ENST00000542033 PHOX2AO14813 284 aa2.53□□□□□ -2
USP28-210ENST00000542033 RAB29O14966 203 aa2.53□□□□□ -2
USP28-210ENST00000542033 MAGEB4O15481 346 aaPredicted RBP2.53□□□□□ -2
USP28-210ENST00000542033 TAPBPO15533 448 aa2.53□□□□□ -2
USP28-210ENST00000542033 CA11O75493 328 aa2.53□□□□□ -2
USP28-210ENST00000542033 STK16O75716 305 aa2.53□□□□□ -2
USP28-210ENST00000542033 MMP23AO75900 390 aa2.53□□□□□ -2
USP28-210ENST00000542033 SLC25A27O95847 323 aa2.53□□□□□ -2
USP28-210ENST00000542033 HPRT1P00492 218 aa2.53□□□□□ -2
USP28-210ENST00000542033 OR8U9P0C7N5 309 aa2.53□□□□□ -2
USP28-210ENST00000542033 PET100P0DJ07 73 aa2.53□□□□□ -2
USP28-210ENST00000542033 RD3LP0DJH9 198 aa2.53□□□□□ -2
USP28-210ENST00000542033 CD79AP11912 226 aa2.53□□□□□ -2
USP28-210ENST00000542033 NCK1P16333 377 aa2.53□□□□□ -2
USP28-210ENST00000542033 AKR1C4P17516 323 aa2.53□□□□□ -2
USP28-210ENST00000542033 GGT1P19440 569 aa2.53□□□□□ -2
USP28-210ENST00000542033 PCMT1P22061 227 aa2.53□□□□□ -2
USP28-210ENST00000542033 KDELR2P33947 212 aa2.53□□□□□ -2
USP28-210ENST00000542033 BDKRB1P46663 353 aa2.53□□□□□ -2
USP28-210ENST00000542033 LGALS7P47929 136 aa2.53□□□□□ -2
USP28-210ENST00000542033 HCCSP53701 268 aa2.53□□□□□ -2
USP28-210ENST00000542033 OR2B8PP59922 312 aa2.53□□□□□ -2
USP28-210ENST00000542033 SEC61GP60059 68 aa2.53□□□□□ -2
USP28-210ENST00000542033 CDK6Q00534 326 aa2.53□□□□□ -2
USP28-210ENST00000542033 OR5I1Q13606 314 aa2.53□□□□□ -2
USP28-210ENST00000542033 GPNMBQ14956 572 aa2.53□□□□□ -2
USP28-210ENST00000542033 SF3A2Q15428 464 aaKnown RBP2.53□□□□□ -2
USP28-210ENST00000542033 MAPK14Q16539 360 aa2.53□□□□□ -2
USP28-210ENST00000542033 UBE2SQ16763 222 aa2.53□□□□□ -2
USP28-210ENST00000542033 C15orf32Q32M92 178 aa2.53□□□□□ -2
USP28-210ENST00000542033 TIMM50Q3ZCQ8 353 aa2.53□□□□□ -2
USP28-210ENST00000542033 GLYR1Q49A26 553 aaPredicted RBP2.53□□□□□ -2
USP28-210ENST00000542033 CTSL3PQ5NE16 218 aa2.53□□□□□ -2
USP28-210ENST00000542033 SAMD4BQ5PRF9 694 aaKnown RBP2.53□□□□□ -2
USP28-210ENST00000542033 TMEM244Q5VVB8 128 aa2.53□□□□□ -2
USP28-210ENST00000542033 TMEM42Q69YG0 159 aa2.53□□□□□ -2
USP28-210ENST00000542033 KCNIP4Q6PIL6 250 aa2.53□□□□□ -2
USP28-210ENST00000542033 SMARCD3Q6STE5 483 aa2.53□□□□□ -2
USP28-210ENST00000542033 DRAM2Q6UX65 266 aa2.53□□□□□ -2
USP28-210ENST00000542033 STAC2Q6ZMT1 411 aa2.53□□□□□ -2
USP28-210ENST00000542033 ZNF620Q6ZNG0 422 aa2.53□□□□□ -2
USP28-210ENST00000542033 HIST2H3AQ71DI3 136 aa2.53□□□□□ -2
USP28-210ENST00000542033 OR2W3Q7Z3T1 314 aa2.53□□□□□ -2
USP28-210ENST00000542033 DEFB128Q7Z7B8 93 aa2.53□□□□□ -2
USP28-210ENST00000542033 S100A7AQ86SG5 101 aa2.53□□□□□ -2
USP28-210ENST00000542033 SCD5Q86SK9 330 aa2.53□□□□□ -2
USP28-210ENST00000542033 NIT1Q86X76 327 aa2.53□□□□□ -2
USP28-210ENST00000542033 SLC30A8Q8IWU4 369 aa2.53□□□□□ -2
USP28-210ENST00000542033 RIMKLAQ8IXN7 391 aa2.53□□□□□ -2
USP28-210ENST00000542033 DEFB107AQ8IZN7 70 aa2.53□□□□□ -2
USP28-210ENST00000542033 GTPBP8Q8N3Z3 284 aaPredicted RBP2.53□□□□□ -2
USP28-210ENST00000542033 BPIFB2Q8N4F0 458 aa2.53□□□□□ -2
USP28-210ENST00000542033 CSNK1G2-AS1Q8NCQ2 148 aa2.53□□□□□ -2
USP28-210ENST00000542033 OR4D9Q8NGE8 314 aa2.53□□□□□ -2
USP28-210ENST00000542033 OR56A4Q8NGH8 313 aa2.53□□□□□ -2
USP28-210ENST00000542033 OR1S1Q8NH92 325 aa2.53□□□□□ -2
USP28-210ENST00000542033 FLVCR1-AS1Q8TAF5 88 aa2.53□□□□□ -2
USP28-210ENST00000542033 CNIH3Q8TBE1 160 aa2.53□□□□□ -2
USP28-210ENST00000542033 SLC7A13Q8TCU3 470 aa2.53□□□□□ -2
USP28-210ENST00000542033 TMEM239Q8WW34 195 aa2.53□□□□□ -2
USP28-210ENST00000542033 IL1F10Q8WWZ1 152 aa2.53□□□□□ -2
USP28-210ENST00000542033 POP5Q969H6 163 aaKnown RBP2.53□□□□□ -2
USP28-210ENST00000542033 PTH2Q96A98 100 aa2.53□□□□□ -2
USP28-210ENST00000542033 NTNG2Q96CW9 530 aa2.53□□□□□ -2
USP28-210ENST00000542033 CPB2Q96IY4 423 aa2.53□□□□□ -2
USP28-210ENST00000542033 C12orf42Q96LP6 360 aa2.53□□□□□ -2
USP28-210ENST00000542033 JSRP1Q96MG2 331 aaPredicted RBP2.53□□□□□ -2
USP28-210ENST00000542033 TSSK3Q96PN8 268 aa2.53□□□□□ -2
USP28-210ENST00000542033 OR2M4Q96R27 311 aa2.53□□□□□ -2
USP28-210ENST00000542033 SDHCQ99643 169 aaPredicted RBP2.53□□□□□ -2
USP28-210ENST00000542033 TIMM29Q9BSF4 260 aa2.53□□□□□ -2
USP28-210ENST00000542033 SUCNR1Q9BXA5 334 aa2.53□□□□□ -2
USP28-210ENST00000542033 NXF5Q9H1B4 397 aaKnown RBP2.53□□□□□ -2
USP28-210ENST00000542033 C20orf85Q9H1P6 137 aa2.53□□□□□ -2
USP28-210ENST00000542033 MED28Q9H204 178 aa2.53□□□□□ -2
USP28-210ENST00000542033 CST9LQ9H4G1 147 aa2.53□□□□□ -2
USP28-210ENST00000542033 ZNF385DQ9H6B1 395 aa2.53□□□□□ -2
USP28-210ENST00000542033 LYRM4Q9HD34 91 aa2.53□□□□□ -2
USP28-210ENST00000542033 AMBNQ9NP70 447 aa2.53□□□□□ -2
USP28-210ENST00000542033 ISYNA1Q9NPH2 558 aa2.53□□□□□ -2
USP28-210ENST00000542033 FBXO6Q9NRD1 293 aaPredicted RBP2.53□□□□□ -2
USP28-210ENST00000542033 SLC2A8Q9NY64 477 aa2.53□□□□□ -2
USP28-210ENST00000542033 IL17CQ9P0M4 197 aa2.53□□□□□ -2
USP28-210ENST00000542033 ONECUT1Q9UBC0 465 aa2.53□□□□□ -2
USP28-210ENST00000542033 ZNF629Q9UEG4 869 aaPredicted RBP2.53□□□□□ -2
USP28-210ENST00000542033 PDE10AQ9Y233 779 aa2.53□□□□□ -2
USP28-210ENST00000542033 OARD1Q9Y530 152 aa2.53□□□□□ -2
USP28-210ENST00000542033 DDX60Q8IY21 1712 aaKnown RBP2.53□□□□□ -2
USP28-210ENST00000542033 FAM208AQ9UK61 1670 aaKnown RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms