RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 TPRA1Q86W33 373 aa12.84□□□□□ -0.35
DDB1-218ENST00000540784 PPP1R35Q8TAP8 253 aa12.84□□□□□ -0.35
DDB1-218ENST00000540784 GFI1Q99684 422 aa12.84□□□□□ -0.35
DDB1-218ENST00000540784 C7orf69Q9H7B7 122 aa12.84□□□□□ -0.35
DDB1-218ENST00000540784 ABCA1O95477 2261 aa12.83□□□□□ -0.35
DDB1-218ENST00000540784 CSPG4Q6UVK1 2322 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 ZANQ9Y493 2812 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 A0A0G2JK05 382 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 A0A1W2PP11 408 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 SHISA3A0PJX4 238 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 TMEM82A0PJX8 343 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 C22orf46C9J442 243 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 SIRPB1O00241 398 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 SLC17A2O00624 439 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 ZNF737O75373 536 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 CRTAPO75718 401 aaPredicted RBP12.83□□□□□ -0.36
DDB1-218ENST00000540784 IL13RA2Q14627 380 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 RAB11BQ15907 218 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 PIGYQ3MUY2 71 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 NHLRC3Q5JS37 347 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 Q6P435 159 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 GDPD3Q7L5L3 318 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 CHST4Q8NCG5 386 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 OR13F1Q8NGS4 319 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 SLC25A28Q96A46 364 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 C1orf147Q96MC9 270 aaPredicted RBP12.83□□□□□ -0.36
DDB1-218ENST00000540784 DCTN5Q9BTE1 182 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 CENPOQ9BU64 300 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 MRI1Q9BV20 369 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 CST11Q9H112 138 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 BANF2Q9H503 90 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 TMEM160Q9NX00 188 aa12.83□□□□□ -0.36
DDB1-218ENST00000540784 RPUSD1Q9UJJ7 312 aaKnown RBP12.83□□□□□ -0.36
DDB1-218ENST00000540784 BPNT1O95861 308 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 TFAP2AP05549 437 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 PPIAL4GP0DN37 164 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 ARSBP15848 533 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 SDC2P34741 201 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 RBM11P57052 281 aaKnown RBP12.82□□□□□ -0.36
DDB1-218ENST00000540784 OR10A3P58181 314 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 PAX8Q06710 450 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 P2RY14Q15391 338 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 GRK1Q15835 563 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 FAM120AOSQ5T036 256 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 HES5Q5TA89 166 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 C17orf107Q6ZR85 190 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 LINC00596Q86U02 117 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 OR8H2Q8N162 312 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 LY6G5BQ8NDX9 201 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 OR4S1Q8NGB4 309 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 KCNG3Q8TAE7 436 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 DMRTB1Q96MA1 342 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 FUNDC2Q9BWH2 189 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 SELENOIQ9C0D9 397 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 CHST6Q9GZX3 395 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 SHARPINQ9H0F6 387 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 RNF167Q9H6Y7 350 aa12.82□□□□□ -0.36
DDB1-218ENST00000540784 MALRD1Q5VYJ5 2156 aa12.81□□□□□ -0.36
DDB1-218ENST00000540784 TRBV23-1A0A0A0MS06 115 aa12.81□□□□□ -0.36
DDB1-218ENST00000540784 IFITM5A6NNB3 132 aa12.81□□□□□ -0.36
DDB1-218ENST00000540784 INAFM1C9JVW0 142 aa12.81□□□□□ -0.36
DDB1-218ENST00000540784 SLC33A1O00400 549 aaPredicted RBP12.81□□□□□ -0.36
DDB1-218ENST00000540784 MGST3O14880 152 aa12.81□□□□□ -0.36
DDB1-218ENST00000540784 GEMIN2O14893 280 aaKnown RBP12.81□□□□□ -0.36
DDB1-218ENST00000540784 PSPNO60542 156 aa12.81□□□□□ -0.36
DDB1-218ENST00000540784 OR7C1O76099 320 aaPredicted RBP12.81□□□□□ -0.36
DDB1-218ENST00000540784 MGMTP16455 207 aa12.81□□□□□ -0.36
DDB1-218ENST00000540784 HNF1AP20823 631 aa12.81□□□□□ -0.36
DDB1-218ENST00000540784 ALDH3B2P48448 385 aa12.81□□□□□ -0.36
DDB1-218ENST00000540784 LSM3P62310 102 aaKnown RBP12.81□□□□□ -0.36
DDB1-218ENST00000540784 RPL31P62899 125 aaKnown RBP12.81□□□□□ -0.36
DDB1-218ENST00000540784 TAF9Q16594 264 aa12.81□□□□□ -0.36
DDB1-218ENST00000540784 MPV17LQ2QL34 196 aa12.81□□□□□ -0.36
DDB1-218ENST00000540784 C2orf76Q3KRA6 126 aa12.81□□□□□ -0.36
DDB1-218ENST00000540784 TMEM104Q8NE00 496 aa12.81□□□□□ -0.36
DDB1-218ENST00000540784 OR4M1Q8NGD0 313 aa12.81□□□□□ -0.36
DDB1-218ENST00000540784 FAM46BQ96A09 425 aa12.81□□□□□ -0.36
DDB1-218ENST00000540784 DACT3Q96B18 629 aaPredicted RBP12.81□□□□□ -0.36
DDB1-218ENST00000540784 BEX2Q9BXY8 128 aa12.81□□□□□ -0.36
DDB1-218ENST00000540784 TMPRSS13Q9BYE2 586 aa12.81□□□□□ -0.36
DDB1-218ENST00000540784 STEAP1Q9UHE8 339 aa12.81□□□□□ -0.36
DDB1-218ENST00000540784 AUP1Q9Y679 476 aa12.81□□□□□ -0.36
DDB1-218ENST00000540784 A0A1W2PQ09 198 aa12.8□□□□□ -0.36
DDB1-218ENST00000540784 NOTOA8MTQ0 251 aa12.8□□□□□ -0.36
DDB1-218ENST00000540784 H3BUI4 141 aa12.8□□□□□ -0.36
DDB1-218ENST00000540784 MPIG6BO95866 241 aa12.8□□□□□ -0.36
DDB1-218ENST00000540784 VSIG8P0DPA2 414 aa12.8□□□□□ -0.36
DDB1-218ENST00000540784 OR3A1P47881 315 aa12.8□□□□□ -0.36
DDB1-218ENST00000540784 CLDN12P56749 244 aa12.8□□□□□ -0.36
DDB1-218ENST00000540784 EDDM3BP56851 147 aa12.8□□□□□ -0.36
DDB1-218ENST00000540784 ARF6P62330 175 aa12.8□□□□□ -0.36
DDB1-218ENST00000540784 MXD1Q05195 221 aa12.8□□□□□ -0.36
DDB1-218ENST00000540784 ATAD3CQ5T2N8 411 aa12.8□□□□□ -0.36
DDB1-218ENST00000540784 OR10K2Q6IF99 312 aa12.8□□□□□ -0.36
DDB1-218ENST00000540784 GPR141Q7Z602 305 aa12.8□□□□□ -0.36
DDB1-218ENST00000540784 FAM185AQ8N0U4 392 aa12.8□□□□□ -0.36
DDB1-218ENST00000540784 TEX29Q8N6K0 151 aa12.8□□□□□ -0.36
DDB1-218ENST00000540784 OR51D1Q8NGF3 324 aa12.8□□□□□ -0.36
DDB1-218ENST00000540784 C8orf46Q8TAG6 207 aa12.8□□□□□ -0.36
DDB1-218ENST00000540784 FAM3DQ96BQ1 224 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms