RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 OSGIN2Q9Y236 505 aa14.74□□□□□ -0.05
EPB41L3-204ENST00000540638 CD300LBA8K4G0 201 aa14.74□□□□□ -0.05
EPB41L3-204ENST00000540638 SIRPB1O00241 398 aa14.74□□□□□ -0.05
EPB41L3-204ENST00000540638 PET100P0DJ07 73 aa14.74□□□□□ -0.05
EPB41L3-204ENST00000540638 CALCRP30988 508 aa14.74□□□□□ -0.05
EPB41L3-204ENST00000540638 HOXC12P31275 282 aa14.74□□□□□ -0.05
EPB41L3-204ENST00000540638 TMEM88Q6PEY1 159 aa14.74□□□□□ -0.05
EPB41L3-204ENST00000540638 CDH20Q9HBT6 801 aa14.74□□□□□ -0.05
EPB41L3-204ENST00000540638 PCDHB16Q9NRJ7 776 aa14.74□□□□□ -0.05
EPB41L3-204ENST00000540638 FBXO9Q9UK97 447 aaPredicted RBP14.74□□□□□ -0.05
EPB41L3-204ENST00000540638 KCNS2Q9ULS6 477 aa14.74□□□□□ -0.05
EPB41L3-204ENST00000540638 FAM96BQ9Y3D0 163 aa14.74□□□□□ -0.05
EPB41L3-204ENST00000540638 NBEAQ8NFP9 2946 aa14.74□□□□□ -0.05
EPB41L3-204ENST00000540638 COL5A1P20908 1838 aaPredicted RBP14.74□□□□□ -0.05
EPB41L3-204ENST00000540638 F12P00748 615 aaPredicted RBP14.74□□□□□ -0.05
EPB41L3-204ENST00000540638 RBM39Q14498 530 aaKnown RBP14.74□□□□□ -0.05
EPB41L3-204ENST00000540638 TMEM268Q5VZI3 342 aa14.74□□□□□ -0.05
EPB41L3-204ENST00000540638 LIME1Q9H400 295 aa14.74□□□□□ -0.05
EPB41L3-204ENST00000540638 KCNMB2Q9Y691 235 aa14.74□□□□□ -0.05
EPB41L3-204ENST00000540638 ARPC4-TTLL3A0A0A6YYG9 625 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 C21orf140B9A014 251 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 WRBO00258 174 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 TK1P04183 234 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 CHATP28329 748 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 DEFB109BQ30KR1 87 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 RAB18Q9NP72 206 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 CEP295Q9C0D2 2601 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 F8W036 122 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 AGFG2O95081 481 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 SCTP09683 121 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 RPL12P30050 165 aaKnown RBP14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 ID4P47928 161 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 ERVS71-1P61550 626 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 BLOC1S1P78537 153 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 RIPPLY2Q5TAB7 128 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 FAHD2BQ6P2I3 314 aaPredicted RBP14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 ZNF695Q8IW36 515 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 TMEM217Q8N7C4 229 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 BPIFCQ8NFQ6 507 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 APOBEC3DQ96AK3 386 aaPredicted RBP14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 FAHD2AQ96GK7 314 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 RNF126Q9BV68 326 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 SLC2A9Q9NRM0 540 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 FBLN5Q9UBX5 448 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 CELA3BP08861 270 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 RNFT1Q5M7Z0 435 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 MDP1Q86V88 176 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 BVESQ8NE79 360 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 LRRC46Q96FV0 321 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 SYT3Q9BQG1 590 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 NUP50Q9UKX7 468 aa14.73□□□□□ -0.05
EPB41L3-204ENST00000540638 MFSD2BA6NFX1 497 aa14.72□□□□□ -0.05
EPB41L3-204ENST00000540638 HOXA4Q00056 320 aaPredicted RBP14.72□□□□□ -0.05
EPB41L3-204ENST00000540638 CRIP3Q6Q6R5 217 aa14.72□□□□□ -0.05
EPB41L3-204ENST00000540638 CCDC36Q8IYA8 594 aa14.72□□□□□ -0.05
EPB41L3-204ENST00000540638 TAF9BQ9HBM6 251 aa14.72□□□□□ -0.05
EPB41L3-204ENST00000540638 OBP2BQ9NPH6 170 aa14.72□□□□□ -0.05
EPB41L3-204ENST00000540638 WISP2O76076 250 aa14.72□□□□□ -0.05
EPB41L3-204ENST00000540638 RBM11P57052 281 aaKnown RBP14.72□□□□□ -0.05
EPB41L3-204ENST00000540638 HIST1H3AP68431 136 aa14.72□□□□□ -0.05
EPB41L3-204ENST00000540638 HIST2H3PS2Q5TEC6 136 aa14.72□□□□□ -0.05
EPB41L3-204ENST00000540638 HIST2H3AQ71DI3 136 aa14.72□□□□□ -0.05
EPB41L3-204ENST00000540638 DHRS9Q9BPW9 319 aa14.72□□□□□ -0.05
EPB41L3-204ENST00000540638 RASL12Q9NYN1 266 aa14.72□□□□□ -0.05
EPB41L3-204ENST00000540638 CFAP47Q6ZTR5 3102 aa14.72□□□□□ -0.05
EPB41L3-204ENST00000540638 CD37P11049 281 aa14.71□□□□□ -0.05
EPB41L3-204ENST00000540638 LTC4SQ16873 150 aa14.71□□□□□ -0.05
EPB41L3-204ENST00000540638 RTL6Q6ICC9 239 aa14.71□□□□□ -0.05
EPB41L3-204ENST00000540638 SLC25A24Q6NUK1 477 aa14.71□□□□□ -0.05
EPB41L3-204ENST00000540638 ATRAIDQ6UW56 229 aa14.71□□□□□ -0.05
EPB41L3-204ENST00000540638 SLC30A7Q8NEW0 376 aa14.71□□□□□ -0.05
EPB41L3-204ENST00000540638 PLPPR2Q96GM1 343 aa14.71□□□□□ -0.05
EPB41L3-204ENST00000540638 GTF3C1Q12789 2109 aa14.71□□□□□ -0.05
EPB41L3-204ENST00000540638 H3BP45 60 aa14.71□□□□□ -0.05
EPB41L3-204ENST00000540638 SLC34A2O95436 690 aa14.71□□□□□ -0.05
EPB41L3-204ENST00000540638 MMP7P09237 267 aaPredicted RBP14.71□□□□□ -0.05
EPB41L3-204ENST00000540638 ZNF708P17019 499 aa14.71□□□□□ -0.05
EPB41L3-204ENST00000540638 FABP6P51161 128 aa14.71□□□□□ -0.05
EPB41L3-204ENST00000540638 ALKBH6Q3KRA9 238 aa14.71□□□□□ -0.05
EPB41L3-204ENST00000540638 PIK3IP1Q96FE7 263 aa14.71□□□□□ -0.05
EPB41L3-204ENST00000540638 SLC25A32Q9H2D1 315 aa14.71□□□□□ -0.05
EPB41L3-204ENST00000540638 RGCCQ9H4X1 137 aa14.71□□□□□ -0.05
EPB41L3-204ENST00000540638 SNAPC5O75971 98 aa14.71□□□□□ -0.06
EPB41L3-204ENST00000540638 ZNF169Q14929 603 aaPredicted RBP14.71□□□□□ -0.06
EPB41L3-204ENST00000540638 NSUN5P2Q63ZY6 315 aa14.71□□□□□ -0.06
EPB41L3-204ENST00000540638 PRSS54Q6PEW0 395 aa14.71□□□□□ -0.06
EPB41L3-204ENST00000540638 MYPOPQ86VE0 399 aaPredicted RBP14.71□□□□□ -0.06
EPB41L3-204ENST00000540638 TMEM178AQ8NBL3 297 aa14.71□□□□□ -0.06
EPB41L3-204ENST00000540638 TM2D1Q9BX74 207 aa14.71□□□□□ -0.06
EPB41L3-204ENST00000540638 KRBOX1C9JBD0 128 aa14.7□□□□□ -0.06
EPB41L3-204ENST00000540638 RHBDL1O75783 438 aa14.7□□□□□ -0.06
EPB41L3-204ENST00000540638 SLC25A4P12235 298 aa14.7□□□□□ -0.06
EPB41L3-204ENST00000540638 HOXD11P31277 338 aaPredicted RBP14.7□□□□□ -0.06
EPB41L3-204ENST00000540638 VHLLQ6RSH7 139 aa14.7□□□□□ -0.06
EPB41L3-204ENST00000540638 TFAP2EQ6VUC0 442 aa14.7□□□□□ -0.06
EPB41L3-204ENST00000540638 MARC2Q969Z3 335 aa14.7□□□□□ -0.06
EPB41L3-204ENST00000540638 OR2J1Q9GZK6 312 aa14.7□□□□□ -0.06
EPB41L3-204ENST00000540638 B8ZZF3 427 aa14.7□□□□□ -0.06
EPB41L3-204ENST00000540638 FDCSPQ8NFU4 85 aa14.7□□□□□ -0.06
EPB41L3-204ENST00000540638 NMES1Q9C002 83 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms